SMTL ID : 6tmr.1

Mokola virus glycoprotein, monomeric post-fusion conformation

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.89 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: G.34, C.35, N.36, N.202 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:N.36 Hydrogen bonds: A:N.36

6 x TB: TERBIUM(III) ION(Non-covalent)(Non-functional Binders)

TB.2: 2 residues within 4Å: Chain A: S.341, K.342 No protein-ligand interaction detected (PLIP) TB.3: 2 residues within 4Å: Chain A: E.267 Ligands: TB.6 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.267 TB.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) TB.5: 1 residues within 4Å: Chain A: E.9 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.9, A:E.9 TB.6: 3 residues within 4Å: Chain A: R.264, E.267 Ligands: TB.3 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.267 TB.7: 1 residues within 4Å: Chain A: E.69 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.69, A:E.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Belot, L. et al., Crystal structure of Mokola virus glycoprotein in its post-fusion conformation. Plos Pathog. (2020)

Release Date

2020-02-19

Peptides

Glycoprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glycoprotein