SMTL ID : 6tnm.1

E. coli aerobic trifunctional enzyme subunit-alpha

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.95 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: F.87, L.90, E.133, E.153, I.158, G.161, F.162, F.291 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.133, A:E.153, A:G.161

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 6 residues within 4Å: Chain A: D.357, I.358, V.414, V.415, V.420, K.598 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.335, A:V.415 Salt bridges: A:K.598

7 x NO3: NITRATE ION(Non-functional Binders)

NO3.3: 4 residues within 4Å: Chain A: K.44, V.80, I.84, Q.311 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.311 NO3.4: 6 residues within 4Å: Chain A: A.82, F.87, G.129, P.152, E.153, L.156 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.82, A:P.152, A:E.153 NO3.5: 3 residues within 4Å: Chain A: F.545, I.642, W.688 No protein-ligand interaction detected (PLIP) NO3.6: 0 residues within 4Å: (No contacts) 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Q.311 NO3.7: 2 residues within 4Å: Chain A: P.468 Ligands: NO3.9 No protein-ligand interaction detected (PLIP) NO3.8: 1 residues within 4Å: Chain A: R.148 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.148 NO3.9: 2 residues within 4Å: Chain A: R.471 Ligands: NO3.7 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.471

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sah-Teli, S.K. et al., Insights into the stability and substrate specificity of the E. coli aerobic beta-oxidation trifunctional enzyme complex. J.Struct.Biol. (2020)

Release Date

2020-03-25

Peptides

Fatty acid oxidation complex subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid oxidation complex subunit alpha