SMTL ID : 6tpk.1

Crystal structure of the human oxytocin receptor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

1 x NU2: (3~{R},6~{R})-6-[(2~{S})-butan-2-yl]-3-(2,3-dihydro-1~{H}-inden-2-yl)-1-[(1~{R})-1-(2-methyl-1,3-oxazol-4-yl)-2-morpholin-4-yl-2-oxidanylidene-ethyl]piperazine-2,5-dione(Non-covalent)

NU2.1: 13 residues within 4Å: Chain A: Q.58, K.82, Q.85, M.89, Q.137, F.141, I.167, I.170, W.254, F.257, Q.261, F.277, A.284 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Q.58, A:Q.85, A:I.167, A:I.170, A:W.254, A:F.257, A:Q.261, A:A.284 Hydrogen bonds: A:K.82, A:Q.85, A:Q.137

1 x CLR: CHOLESTEROL(Non-covalent)

CLR.2: 6 residues within 4Å: Chain A: P.136, F.157, I.158, A.165, Y.166, W.169 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:P.136, A:I.158, A:A.165, A:W.169, A:W.169 Hydrogen bonds: A:I.158

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 3 residues within 4Å: Chain A: E.315, G.320, R.325 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.320, A:R.322, A:R.325

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Waltenspuhl, Y. et al., Crystal structure of the human oxytocin receptor. Sci Adv (2020)

Release Date

2020-08-05

Peptides

Oxytocin receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Oxytocin receptor