SMTL ID : 6trt.1

Chaetomium thermophilum UDP-Glucose Glucosyl Transferase (UGGT) double cysteine mutant S180C/T742C.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 4.58 Å

Oligo State

monomer

Ligands

2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 3 residues within 4Å: Chain A: N.618, S.620, M.621 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.3: 3 residues within 4Å: Chain A: H.1204, H.1205, N.1207 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-MAN-MAN-MAN.2: 6 residues within 4Å: Chain A: N.36, T.38, G.73, H.74, E.658, H.660 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.73

3 x TB: TERBIUM(III) ION(Non-covalent)

TB.4: 5 residues within 4Å: Chain A: D.1282, D.1284, D.1415, L.1416, K.1426 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.1284, A:D.1415 TB.5: 3 residues within 4Å: Chain A: E.750, T.751, E.754 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.750 TB.6: 4 residues within 4Å: Chain A: E.693, E.696, A.797, D.798 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.693, A:E.696, A:E.696

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.7: 2 residues within 4Å: Chain A: G.320, N.874 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.874 NAG.8: 1 residues within 4Å: Chain A: N.309 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Modenutti, C.P. et al., Clamping, bending, and twisting inter-domain motions in the misfold-recognizing portion of UDP-glucose: Glycoprotein glucosyltransferase. Structure (2021)

Release Date

2020-01-08

Peptides

UDP-glucose-glycoprotein glucosyltransferase-like protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-glucose-glycoprotein glucosyltransferase-like protein