SMTL ID : 6tv2.1 (3 other biounits)

Heme d1 biosynthesis associated Protein NirF

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.56 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain B: R.175, F.176, R.177 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.177 Water bridges: B:R.177, B:R.177 Salt bridges: B:R.177 SO4.3: 3 residues within 4Å: Chain B: R.129, P.131, G.132 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.132 Water bridges: B:R.129 Salt bridges: B:R.129

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 9 residues within 4Å: Chain A: P.146, G.147, R.149, L.210, W.211 Chain B: R.285, D.287, R.289, Y.351 7 PLIP interactions: 3 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:L.210, A:W.211, B:D.287, B:R.289 Water bridges: A:R.149, B:R.285, B:R.285

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Klunemann, T. et al., Crystal structure of NirF: insights into its role in heme d 1 biosynthesis. Febs J. (2021)

Release Date

2020-04-22

Peptides

Protein NirF: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

Protein NirF

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