SMTL ID : 6tv6.1

Octameric McsB from Bacillus subtilis.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-octamer

Ligands

8 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: R.37, D.149, Y.166 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.149, H2O.1, H2O.1, H2O.1, H2O.1 MG.2: 4 residues within 4Å: Chain B: D.149, D.150, E.153, Y.166 5 PLIP interactions: 1 interactions with chain B, 4 Ligand-Water interactions Metal complexes: B:D.149, H2O.1, H2O.2, H2O.2, H2O.2 MG.3: 3 residues within 4Å: Chain C: R.37, D.149, Y.166 5 PLIP interactions: 1 interactions with chain C, 4 Ligand-Water interactions Metal complexes: C:D.149, H2O.3, H2O.4, H2O.4, H2O.4 MG.4: 3 residues within 4Å: Chain D: R.37, D.149, D.150 5 PLIP interactions: 1 interactions with chain D, 4 Ligand-Water interactions Metal complexes: D:D.149, H2O.4, H2O.4, H2O.5, H2O.5 MG.5: 3 residues within 4Å: Chain E: R.37, D.149, Y.166 5 PLIP interactions: 1 interactions with chain E, 4 Ligand-Water interactions Metal complexes: E:D.149, H2O.5, H2O.5, H2O.6, H2O.6 MG.6: 4 residues within 4Å: Chain F: D.149, D.150, E.153, Y.166 5 PLIP interactions: 1 interactions with chain F, 4 Ligand-Water interactions Metal complexes: F:D.149, H2O.6, H2O.6, H2O.7, H2O.7 MG.7: 3 residues within 4Å: Chain G: R.37, D.149, Y.166 5 PLIP interactions: 1 interactions with chain G, 4 Ligand-Water interactions Metal complexes: G:D.149, H2O.8, H2O.8, H2O.8, H2O.8 MG.8: 3 residues within 4Å: Chain H: R.37, D.149, D.150 5 PLIP interactions: 1 interactions with chain H, 4 Ligand-Water interactions Metal complexes: H:D.149, H2O.9, H2O.9, H2O.9, H2O.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hajdusits, B. et al., McsB forms a gated kinase chamber to mark aberrant bacterial proteins for degradation. Elife (2021)

Release Date

2021-07-21

Peptides

Protein-arginine kinase: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
A

F
B

G
C

H
D

Protein-arginine kinase