SMTL ID : 6tvn.4 (3 other biounits)

Crystal Structure of 5-bromoindoline-2,3-dione covalently bound to the PH domain of Bruton's tyrosine kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.31 Å

Oligo State

monomer

Ligands

1 x NYQ: 5-bromanyl-1,3-dihydroindol-2-one(Covalent)

NYQ.1: 8 residues within 4Å: Chain A: K.11, S.13, Q.14, L.36, Y.38, S.54, I.55, L.110 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:K.11, A:I.55, A:L.110 Hydrogen bonds: A:K.11, A:Q.14, A:Y.38 pi-Stacking: A:Y.38 Halogen bonds: A:L.36

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: H.142, C.153, C.154, C.164 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.142, A:C.153, A:C.154, A:C.164

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 1 residues within 4Å: Chain A: E.95 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.95, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brear, P. et al., Crystal Structure of 1-methylindoline-2,3-dione covalently bound to the PH domain of Bruton's tyrosine kinase mutant R28C. To Be Published

Release Date

2020-11-25

Peptides

Tyrosine-protein kinase BTK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Tyrosine-protein kinase BTK

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