SMTL ID : 6tw9.1

HumRadA22F in complex with CAM833

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.52 Å

Oligo State

monomer

Ligands

1 x O08: ~{N}-[2-[(2~{S},4~{R})-2-[[(1~{S})-1-(2-chloranyl-4-methoxy-phenyl)ethyl]carbamoyl]-4-oxidanyl-pyrrolidin-1-yl]-2-oxidanylidene-ethyl]-6-fluoranyl-quinoline-2-carboxamide(Non-covalent)

O08.1: 17 residues within 4Å: Chain A: M.63, Y.64, I.65, F.71, P.73, L.76, L.91, V.94, A.95, Y.96, A.97, L.108, V.109, Q.111, A.112, L.129 Ligands: GOL.3 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:M.63, A:I.65, A:F.71, A:P.73, A:L.91, A:L.91, A:L.91, A:Y.96, A:A.97, A:Q.111, A:A.112 Hydrogen bonds: A:V.94, A:Y.96, A:Y.96

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: G.35, G.37, K.38, T.39, Q.40 No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: A.97, H.104, L.108, Q.111 Ligands: O08.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.104, A:Q.111, A:Q.111 Water bridges: A:Y.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scott, D.E. et al., A small-molecule inhibitor of the BRCA2-RAD51 interaction modulates RAD51 assembly and potentiates DNA damage-induced cell death. Cell Chem Biol (2021)

Release Date

2021-01-27

Peptides

DNA repair and recombination protein RadA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA repair and recombination protein RadA

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