SMTL ID : 6txk.1

Crystal structure of thermotoga maritima E65K Ferritin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.36 Å

Oligo State

homo-24-mer

Ligands

24 x FE: FE (III) ION(Non-covalent)

FE.1: 6 residues within 4Å: Chain A: E.19, E.52, H.55, V.99, Q.129, E.132 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.19, A:E.52 FE.8: 4 residues within 4Å: Chain B: E.19, E.52, H.55, Q.129 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:E.19, B:E.52, B:H.55 FE.19: 4 residues within 4Å: Chain C: E.19, E.52, H.55, Q.129 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:E.19, C:E.52, C:H.55 FE.26: 5 residues within 4Å: Chain D: E.19, E.52, H.55, E.96, Q.129 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:E.19, D:E.52, D:H.55 FE.35: 4 residues within 4Å: Chain E: E.19, E.52, H.55, Q.129 3 PLIP interactions: 3 interactions with chain E Metal complexes: E:E.19, E:E.52, E:H.55 FE.40: 4 residues within 4Å: Chain F: E.19, E.52, H.55, Q.129 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:E.19, F:E.19, F:E.52, F:H.55 FE.44: 5 residues within 4Å: Chain G: E.19, E.52, H.55, Q.129, E.132 3 PLIP interactions: 3 interactions with chain G Metal complexes: G:E.19, G:E.52, G:H.55 FE.50: 5 residues within 4Å: Chain H: E.19, E.52, H.55, Q.129, E.132 2 PLIP interactions: 2 interactions with chain H Metal complexes: H:E.19, H:E.52 FE.57: 6 residues within 4Å: Chain I: E.19, E.52, H.55, V.99, Q.129, E.132 2 PLIP interactions: 2 interactions with chain I Metal complexes: I:E.19, I:E.52 FE.64: 4 residues within 4Å: Chain J: E.19, E.52, H.55, Q.129 3 PLIP interactions: 3 interactions with chain J Metal complexes: J:E.19, J:E.52, J:H.55 FE.75: 4 residues within 4Å: Chain K: E.19, E.52, H.55, Q.129 3 PLIP interactions: 3 interactions with chain K Metal complexes: K:E.19, K:E.52, K:H.55 FE.82: 5 residues within 4Å: Chain L: E.19, E.52, H.55, E.96, Q.129 3 PLIP interactions: 3 interactions with chain L Metal complexes: L:E.19, L:E.52, L:H.55 FE.91: 4 residues within 4Å: Chain M: E.19, E.52, H.55, Q.129 3 PLIP interactions: 3 interactions with chain M Metal complexes: M:E.19, M:E.52, M:H.55 FE.96: 4 residues within 4Å: Chain N: E.19, E.52, H.55, Q.129 4 PLIP interactions: 4 interactions with chain N Metal complexes: N:E.19, N:E.19, N:E.52, N:H.55 FE.100: 5 residues within 4Å: Chain O: E.19, E.52, H.55, Q.129, E.132 3 PLIP interactions: 3 interactions with chain O Metal complexes: O:E.19, O:E.52, O:H.55 FE.106: 5 residues within 4Å: Chain P: E.19, E.52, H.55, Q.129, E.132 2 PLIP interactions: 2 interactions with chain P Metal complexes: P:E.19, P:E.52 FE.113: 6 residues within 4Å: Chain Q: E.19, E.52, H.55, V.99, Q.129, E.132 2 PLIP interactions: 2 interactions with chain Q Metal complexes: Q:E.19, Q:E.52 FE.120: 4 residues within 4Å: Chain R: E.19, E.52, H.55, Q.129 3 PLIP interactions: 3 interactions with chain R Metal complexes: R:E.19, R:E.52, R:H.55 FE.131: 4 residues within 4Å: Chain S: E.19, E.52, H.55, Q.129 3 PLIP interactions: 3 interactions with chain S Metal complexes: S:E.19, S:E.52, S:H.55 FE.138: 5 residues within 4Å: Chain T: E.19, E.52, H.55, E.96, Q.129 3 PLIP interactions: 3 interactions with chain T Metal complexes: T:E.19, T:E.52, T:H.55 FE.147: 4 residues within 4Å: Chain U: E.19, E.52, H.55, Q.129 3 PLIP interactions: 3 interactions with chain U Metal complexes: U:E.19, U:E.52, U:H.55 FE.152: 4 residues within 4Å: Chain V: E.19, E.52, H.55, Q.129 4 PLIP interactions: 4 interactions with chain V Metal complexes: V:E.19, V:E.19, V:E.52, V:H.55 FE.156: 5 residues within 4Å: Chain W: E.19, E.52, H.55, Q.129, E.132 3 PLIP interactions: 3 interactions with chain W Metal complexes: W:E.19, W:E.52, W:H.55 FE.162: 5 residues within 4Å: Chain X: E.19, E.52, H.55, Q.129, E.132 2 PLIP interactions: 2 interactions with chain X Metal complexes: X:E.19, X:E.52

96 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: E.97, T.100, E.133 Chain V: V.3, R.66 Ligand excluded by PLIP SO4.4: 3 residues within 4Å: Chain A: P.79, S.80, N.81 Ligand excluded by PLIP SO4.5: 3 residues within 4Å: Chain V: S.111, H.116, V.119 Ligand excluded by PLIP SO4.6: 3 residues within 4Å: Chain A: S.111, H.116, V.119 Ligand excluded by PLIP SO4.7: 2 residues within 4Å: Chain A: S.5, E.6 Ligand excluded by PLIP SO4.9: 2 residues within 4Å: Chain B: S.5, E.6 Ligand excluded by PLIP SO4.10: 3 residues within 4Å: Chain B: G.84, I.85, K.86 Ligand excluded by PLIP SO4.12: 7 residues within 4Å: Chain B: Q.149, S.151 Chain D: S.151 Chain E: Q.149, S.151 Chain I: Q.149, S.151 Ligand excluded by PLIP SO4.16: 3 residues within 4Å: Chain B: P.79, S.80, N.81 Ligand excluded by PLIP SO4.17: 2 residues within 4Å: Ligands: SO4.73, SO4.129 Ligand excluded by PLIP SO4.18: 3 residues within 4Å: Chain B: H.43 Ligands: GOL.14, LFA.15 Ligand excluded by PLIP SO4.23: 4 residues within 4Å: Chain C: S.111, H.116, V.119 Ligands: SO4.46 Ligand excluded by PLIP SO4.24: 2 residues within 4Å: Chain C: S.5, E.6 Ligand excluded by PLIP SO4.25: 8 residues within 4Å: Chain C: Q.149, S.151 Chain H: Q.149, S.151 Chain V: Q.149, S.151 Chain W: Q.149, S.151 Ligand excluded by PLIP SO4.27: 3 residues within 4Å: Chain D: G.84, I.85, K.86 Ligand excluded by PLIP SO4.30: 3 residues within 4Å: Chain D: P.79, S.80, N.81 Ligand excluded by PLIP SO4.31: 3 residues within 4Å: Chain D: S.111, H.116, V.119 Ligand excluded by PLIP SO4.32: 2 residues within 4Å: Chain D: S.5, E.6 Ligand excluded by PLIP SO4.33: 1 residues within 4Å: Chain D: R.69 Ligand excluded by PLIP SO4.34: 6 residues within 4Å: Chain D: R.66 Chain V: E.97, T.100, Q.101, Y.104, E.133 Ligand excluded by PLIP SO4.36: 5 residues within 4Å: Chain C: R.66 Chain E: E.97, T.100, Q.101, E.133 Ligand excluded by PLIP SO4.39: 5 residues within 4Å: Chain E: S.111, H.116, V.119 Chain G: L.107, K.123 Ligand excluded by PLIP SO4.41: 3 residues within 4Å: Chain F: G.84, I.85, K.86 Ligand excluded by PLIP SO4.43: 3 residues within 4Å: Chain F: P.79, S.80, N.81 Ligand excluded by PLIP SO4.46: 4 residues within 4Å: Chain G: S.111, H.116, V.119 Ligands: SO4.23 Ligand excluded by PLIP SO4.47: 3 residues within 4Å: Chain G: P.79, S.80, N.81 Ligand excluded by PLIP SO4.48: 6 residues within 4Å: Chain E: V.3, R.66 Chain G: E.97, T.100, Y.104, E.133 Ligand excluded by PLIP SO4.49: 3 residues within 4Å: Chain G: G.84, I.85, K.86 Ligand excluded by PLIP SO4.51: 5 residues within 4Å: Chain H: E.97, T.100, E.133 Chain X: V.3, R.66 Ligand excluded by PLIP SO4.54: 3 residues within 4Å: Chain H: P.79, S.80, N.81 Ligand excluded by PLIP SO4.55: 3 residues within 4Å: Chain H: G.84, I.85, K.86 Ligand excluded by PLIP SO4.56: 2 residues within 4Å: Chain H: R.18, F.98 Ligand excluded by PLIP SO4.58: 5 residues within 4Å: Chain F: V.3, R.66 Chain I: E.97, T.100, E.133 Ligand excluded by PLIP SO4.60: 3 residues within 4Å: Chain I: P.79, S.80, N.81 Ligand excluded by PLIP SO4.61: 3 residues within 4Å: Chain F: S.111, H.116, V.119 Ligand excluded by PLIP SO4.62: 3 residues within 4Å: Chain I: S.111, H.116, V.119 Ligand excluded by PLIP SO4.63: 2 residues within 4Å: Chain I: S.5, E.6 Ligand excluded by PLIP SO4.65: 2 residues within 4Å: Chain J: S.5, E.6 Ligand excluded by PLIP SO4.66: 3 residues within 4Å: Chain J: G.84, I.85, K.86 Ligand excluded by PLIP SO4.68: 7 residues within 4Å: Chain J: Q.149, S.151 Chain L: S.151 Chain M: Q.149, S.151 Chain Q: Q.149, S.151 Ligand excluded by PLIP SO4.72: 3 residues within 4Å: Chain J: P.79, S.80, N.81 Ligand excluded by PLIP SO4.73: 2 residues within 4Å: Ligands: SO4.17, SO4.129 Ligand excluded by PLIP SO4.74: 3 residues within 4Å: Chain J: H.43 Ligands: GOL.70, LFA.71 Ligand excluded by PLIP SO4.79: 4 residues within 4Å: Chain K: S.111, H.116, V.119 Ligands: SO4.102 Ligand excluded by PLIP SO4.80: 2 residues within 4Å: Chain K: S.5, E.6 Ligand excluded by PLIP SO4.81: 8 residues within 4Å: Chain F: Q.149, S.151 Chain G: Q.149, S.151 Chain K: Q.149, S.151 Chain P: Q.149, S.151 Ligand excluded by PLIP SO4.83: 3 residues within 4Å: Chain L: G.84, I.85, K.86 Ligand excluded by PLIP SO4.86: 3 residues within 4Å: Chain L: P.79, S.80, N.81 Ligand excluded by PLIP SO4.87: 3 residues within 4Å: Chain L: S.111, H.116, V.119 Ligand excluded by PLIP SO4.88: 2 residues within 4Å: Chain L: S.5, E.6 Ligand excluded by PLIP SO4.89: 1 residues within 4Å: Chain L: R.69 Ligand excluded by PLIP SO4.90: 6 residues within 4Å: Chain F: E.97, T.100, Q.101, Y.104, E.133 Chain L: R.66 Ligand excluded by PLIP SO4.92: 5 residues within 4Å: Chain K: R.66 Chain M: E.97, T.100, Q.101, E.133 Ligand excluded by PLIP SO4.95: 5 residues within 4Å: Chain M: S.111, H.116, V.119 Chain O: L.107, K.123 Ligand excluded by PLIP SO4.97: 3 residues within 4Å: Chain N: G.84, I.85, K.86 Ligand excluded by PLIP SO4.99: 3 residues within 4Å: Chain N: P.79, S.80, N.81 Ligand excluded by PLIP SO4.102: 4 residues within 4Å: Chain O: S.111, H.116, V.119 Ligands: SO4.79 Ligand excluded by PLIP SO4.103: 3 residues within 4Å: Chain O: P.79, S.80, N.81 Ligand excluded by PLIP SO4.104: 6 residues within 4Å: Chain M: V.3, R.66 Chain O: E.97, T.100, Y.104, E.133 Ligand excluded by PLIP SO4.105: 3 residues within 4Å: Chain O: G.84, I.85, K.86 Ligand excluded by PLIP SO4.107: 5 residues within 4Å: Chain H: V.3, R.66 Chain P: E.97, T.100, E.133 Ligand excluded by PLIP SO4.110: 3 residues within 4Å: Chain P: P.79, S.80, N.81 Ligand excluded by PLIP SO4.111: 3 residues within 4Å: Chain P: G.84, I.85, K.86 Ligand excluded by PLIP SO4.112: 2 residues within 4Å: Chain P: R.18, F.98 Ligand excluded by PLIP SO4.114: 5 residues within 4Å: Chain N: V.3, R.66 Chain Q: E.97, T.100, E.133 Ligand excluded by PLIP SO4.116: 3 residues within 4Å: Chain Q: P.79, S.80, N.81 Ligand excluded by PLIP SO4.117: 3 residues within 4Å: Chain N: S.111, H.116, V.119 Ligand excluded by PLIP SO4.118: 3 residues within 4Å: Chain Q: S.111, H.116, V.119 Ligand excluded by PLIP SO4.119: 2 residues within 4Å: Chain Q: S.5, E.6 Ligand excluded by PLIP SO4.121: 2 residues within 4Å: Chain R: S.5, E.6 Ligand excluded by PLIP SO4.122: 3 residues within 4Å: Chain R: G.84, I.85, K.86 Ligand excluded by PLIP SO4.124: 7 residues within 4Å: Chain A: Q.149, S.151 Chain R: Q.149, S.151 Chain T: S.151 Chain U: Q.149, S.151 Ligand excluded by PLIP SO4.128: 3 residues within 4Å: Chain R: P.79, S.80, N.81 Ligand excluded by PLIP SO4.129: 2 residues within 4Å: Ligands: SO4.17, SO4.73 Ligand excluded by PLIP SO4.130: 3 residues within 4Å: Chain R: H.43 Ligands: GOL.126, LFA.127 Ligand excluded by PLIP SO4.135: 4 residues within 4Å: Chain S: S.111, H.116, V.119 Ligands: SO4.158 Ligand excluded by PLIP SO4.136: 2 residues within 4Å: Chain S: S.5, E.6 Ligand excluded by PLIP SO4.137: 8 residues within 4Å: Chain N: Q.149, S.151 Chain O: Q.149, S.151 Chain S: Q.149, S.151 Chain X: Q.149, S.151 Ligand excluded by PLIP SO4.139: 3 residues within 4Å: Chain T: G.84, I.85, K.86 Ligand excluded by PLIP SO4.142: 3 residues within 4Å: Chain T: P.79, S.80, N.81 Ligand excluded by PLIP SO4.143: 3 residues within 4Å: Chain T: S.111, H.116, V.119 Ligand excluded by PLIP SO4.144: 2 residues within 4Å: Chain T: S.5, E.6 Ligand excluded by PLIP SO4.145: 1 residues within 4Å: Chain T: R.69 Ligand excluded by PLIP SO4.146: 6 residues within 4Å: Chain N: E.97, T.100, Q.101, Y.104, E.133 Chain T: R.66 Ligand excluded by PLIP SO4.148: 5 residues within 4Å: Chain S: R.66 Chain U: E.97, T.100, Q.101, E.133 Ligand excluded by PLIP SO4.151: 5 residues within 4Å: Chain U: S.111, H.116, V.119 Chain W: L.107, K.123 Ligand excluded by PLIP SO4.153: 3 residues within 4Å: Chain V: G.84, I.85, K.86 Ligand excluded by PLIP SO4.155: 3 residues within 4Å: Chain V: P.79, S.80, N.81 Ligand excluded by PLIP SO4.158: 4 residues within 4Å: Chain W: S.111, H.116, V.119 Ligands: SO4.135 Ligand excluded by PLIP SO4.159: 3 residues within 4Å: Chain W: P.79, S.80, N.81 Ligand excluded by PLIP SO4.160: 6 residues within 4Å: Chain U: V.3, R.66 Chain W: E.97, T.100, Y.104, E.133 Ligand excluded by PLIP SO4.161: 3 residues within 4Å: Chain W: G.84, I.85, K.86 Ligand excluded by PLIP SO4.163: 5 residues within 4Å: Chain P: V.3, R.66 Chain X: E.97, T.100, E.133 Ligand excluded by PLIP SO4.166: 3 residues within 4Å: Chain X: P.79, S.80, N.81 Ligand excluded by PLIP SO4.167: 3 residues within 4Å: Chain X: G.84, I.85, K.86 Ligand excluded by PLIP SO4.168: 2 residues within 4Å: Chain X: R.18, F.98 Ligand excluded by PLIP

36 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain A: R.18, F.98 Ligand excluded by PLIP GOL.11: 6 residues within 4Å: Chain B: E.97, T.100, Y.104, E.133 Chain J: V.3, R.66 Ligand excluded by PLIP GOL.13: 2 residues within 4Å: Chain B: R.18, F.98 Ligand excluded by PLIP GOL.14: 6 residues within 4Å: Chain A: Y.60, E.61 Chain B: D.34, K.39, K.46 Ligands: SO4.18 Ligand excluded by PLIP GOL.20: 3 residues within 4Å: Chain C: R.18, E.76, F.98 Ligand excluded by PLIP GOL.21: 6 residues within 4Å: Chain C: E.97, T.100, Y.104, E.133 Chain G: V.3, R.66 Ligand excluded by PLIP GOL.28: 2 residues within 4Å: Chain D: R.18, F.98 Ligand excluded by PLIP GOL.29: 5 residues within 4Å: Chain A: R.66 Chain D: E.97, T.100, Y.104, E.133 Ligand excluded by PLIP GOL.37: 2 residues within 4Å: Chain E: R.18, F.98 Ligand excluded by PLIP GOL.42: 2 residues within 4Å: Chain F: R.18, F.98 Ligand excluded by PLIP GOL.45: 2 residues within 4Å: Chain G: R.18, F.98 Ligand excluded by PLIP GOL.52: 3 residues within 4Å: Chain H: S.5, E.6, K.7 Ligand excluded by PLIP GOL.59: 2 residues within 4Å: Chain I: R.18, F.98 Ligand excluded by PLIP GOL.67: 6 residues within 4Å: Chain J: E.97, T.100, Y.104, E.133 Chain R: V.3, R.66 Ligand excluded by PLIP GOL.69: 2 residues within 4Å: Chain J: R.18, F.98 Ligand excluded by PLIP GOL.70: 6 residues within 4Å: Chain I: Y.60, E.61 Chain J: D.34, K.39, K.46 Ligands: SO4.74 Ligand excluded by PLIP GOL.76: 3 residues within 4Å: Chain K: R.18, E.76, F.98 Ligand excluded by PLIP GOL.77: 6 residues within 4Å: Chain K: E.97, T.100, Y.104, E.133 Chain O: V.3, R.66 Ligand excluded by PLIP GOL.84: 2 residues within 4Å: Chain L: R.18, F.98 Ligand excluded by PLIP GOL.85: 5 residues within 4Å: Chain I: R.66 Chain L: E.97, T.100, Y.104, E.133 Ligand excluded by PLIP GOL.93: 2 residues within 4Å: Chain M: R.18, F.98 Ligand excluded by PLIP GOL.98: 2 residues within 4Å: Chain N: R.18, F.98 Ligand excluded by PLIP GOL.101: 2 residues within 4Å: Chain O: R.18, F.98 Ligand excluded by PLIP GOL.108: 3 residues within 4Å: Chain P: S.5, E.6, K.7 Ligand excluded by PLIP GOL.115: 2 residues within 4Å: Chain Q: R.18, F.98 Ligand excluded by PLIP GOL.123: 6 residues within 4Å: Chain B: V.3, R.66 Chain R: E.97, T.100, Y.104, E.133 Ligand excluded by PLIP GOL.125: 2 residues within 4Å: Chain R: R.18, F.98 Ligand excluded by PLIP GOL.126: 6 residues within 4Å: Chain Q: Y.60, E.61 Chain R: D.34, K.39, K.46 Ligands: SO4.130 Ligand excluded by PLIP GOL.132: 3 residues within 4Å: Chain S: R.18, E.76, F.98 Ligand excluded by PLIP GOL.133: 6 residues within 4Å: Chain S: E.97, T.100, Y.104, E.133 Chain W: V.3, R.66 Ligand excluded by PLIP GOL.140: 2 residues within 4Å: Chain T: R.18, F.98 Ligand excluded by PLIP GOL.141: 5 residues within 4Å: Chain Q: R.66 Chain T: E.97, T.100, Y.104, E.133 Ligand excluded by PLIP GOL.149: 2 residues within 4Å: Chain U: R.18, F.98 Ligand excluded by PLIP GOL.154: 2 residues within 4Å: Chain V: R.18, F.98 Ligand excluded by PLIP GOL.157: 2 residues within 4Å: Chain W: R.18, F.98 Ligand excluded by PLIP GOL.164: 3 residues within 4Å: Chain X: S.5, E.6, K.7 Ligand excluded by PLIP

12 x LFA: EICOSANE(Non-covalent)

LFA.15: 14 residues within 4Å: Chain A: S.23, Y.24, L.27, K.46, A.49, Q.50, L.53, M.57 Chain B: S.23, Y.24, L.27, K.46, A.49 Ligands: SO4.18 9 PLIP interactions: 4 interactions with chain B, 5 interactions with chain A Hydrophobic interactions: B:Y.24, B:L.27, B:K.46, B:A.49, A:Y.24, A:L.27, A:A.49, A:Q.50, A:L.53 LFA.22: 15 residues within 4Å: Chain C: I.20, S.23, Y.24, K.46, A.49, Q.50, L.53 Chain D: I.20, S.23, Y.24, L.27, K.46, A.49, L.53, M.57 9 PLIP interactions: 5 interactions with chain C, 4 interactions with chain D Hydrophobic interactions: C:I.20, C:Y.24, C:K.46, C:A.49, C:L.53, D:I.20, D:Y.24, D:L.27, D:A.49 LFA.38: 12 residues within 4Å: Chain E: I.20, S.23, Y.24, K.46, M.57 Chain F: I.20, S.23, Y.24, L.27, Q.50, L.53, M.57 9 PLIP interactions: 6 interactions with chain F, 3 interactions with chain E Hydrophobic interactions: F:I.20, F:Y.24, F:L.27, F:Q.50, F:L.53, F:L.53, E:I.20, E:Y.24, E:K.46 LFA.53: 12 residues within 4Å: Chain G: S.23, L.27, Q.50, L.53, M.57 Chain H: S.23, Y.24, L.27, K.46, A.49, L.53, M.57 7 PLIP interactions: 5 interactions with chain H, 2 interactions with chain G Hydrophobic interactions: H:Y.24, H:L.27, H:K.46, H:A.49, H:L.53, G:Q.50, G:L.53 LFA.71: 14 residues within 4Å: Chain I: S.23, Y.24, L.27, K.46, A.49, Q.50, L.53, M.57 Chain J: S.23, Y.24, L.27, K.46, A.49 Ligands: SO4.74 9 PLIP interactions: 4 interactions with chain J, 5 interactions with chain I Hydrophobic interactions: J:Y.24, J:L.27, J:K.46, J:A.49, I:Y.24, I:L.27, I:A.49, I:Q.50, I:L.53 LFA.78: 15 residues within 4Å: Chain K: I.20, S.23, Y.24, K.46, A.49, Q.50, L.53 Chain L: I.20, S.23, Y.24, L.27, K.46, A.49, L.53, M.57 9 PLIP interactions: 5 interactions with chain K, 4 interactions with chain L Hydrophobic interactions: K:I.20, K:Y.24, K:K.46, K:A.49, K:L.53, L:I.20, L:Y.24, L:L.27, L:A.49 LFA.94: 12 residues within 4Å: Chain M: I.20, S.23, Y.24, K.46, M.57 Chain N: I.20, S.23, Y.24, L.27, Q.50, L.53, M.57 9 PLIP interactions: 3 interactions with chain M, 6 interactions with chain N Hydrophobic interactions: M:I.20, M:Y.24, M:K.46, N:I.20, N:Y.24, N:L.27, N:Q.50, N:L.53, N:L.53 LFA.109: 12 residues within 4Å: Chain O: S.23, L.27, Q.50, L.53, M.57 Chain P: S.23, Y.24, L.27, K.46, A.49, L.53, M.57 7 PLIP interactions: 5 interactions with chain P, 2 interactions with chain O Hydrophobic interactions: P:Y.24, P:L.27, P:K.46, P:A.49, P:L.53, O:Q.50, O:L.53 LFA.127: 14 residues within 4Å: Chain Q: S.23, Y.24, L.27, K.46, A.49, Q.50, L.53, M.57 Chain R: S.23, Y.24, L.27, K.46, A.49 Ligands: SO4.130 9 PLIP interactions: 5 interactions with chain Q, 4 interactions with chain R Hydrophobic interactions: Q:Y.24, Q:L.27, Q:A.49, Q:Q.50, Q:L.53, R:Y.24, R:L.27, R:K.46, R:A.49 LFA.134: 15 residues within 4Å: Chain S: I.20, S.23, Y.24, K.46, A.49, Q.50, L.53 Chain T: I.20, S.23, Y.24, L.27, K.46, A.49, L.53, M.57 9 PLIP interactions: 5 interactions with chain S, 4 interactions with chain T Hydrophobic interactions: S:I.20, S:Y.24, S:K.46, S:A.49, S:L.53, T:I.20, T:Y.24, T:L.27, T:A.49 LFA.150: 12 residues within 4Å: Chain U: I.20, S.23, Y.24, K.46, M.57 Chain V: I.20, S.23, Y.24, L.27, Q.50, L.53, M.57 9 PLIP interactions: 6 interactions with chain V, 3 interactions with chain U Hydrophobic interactions: V:I.20, V:Y.24, V:L.27, V:Q.50, V:L.53, V:L.53, U:I.20, U:Y.24, U:K.46 LFA.165: 12 residues within 4Å: Chain W: S.23, L.27, Q.50, L.53, M.57 Chain X: S.23, Y.24, L.27, K.46, A.49, L.53, M.57 7 PLIP interactions: 5 interactions with chain X, 2 interactions with chain W Hydrophobic interactions: X:Y.24, X:L.27, X:K.46, X:A.49, X:L.53, W:Q.50, W:L.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumar, M. et al., A single residue can modulate nanocage assembly in salt dependent ferritin. Nanoscale (2021)

Release Date

2021-07-28

Peptides

Ferritin: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
A

J
B

K
C

L
D

M
E

N
F

O
G

P
H

Q
A

R
B

S
C

T
D

U
E

V
F

W
G

X
H

Ferritin