- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-6-6-1-mer
- Ligands
- 6 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 6 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 3 residues within 4Å:- Chain A: Q.11, E.71
- Ligands: GTP.1
No protein-ligand interaction detected (PLIP)MG.5: 3 residues within 4Å:- Chain C: A.99, T.145
- Ligands: GTP.4
No protein-ligand interaction detected (PLIP)MG.8: 3 residues within 4Å:- Chain E: Q.11, E.71
- Ligands: GTP.7
1 PLIP interactions:1 interactions with chain E- Metal complexes: E:E.71
MG.11: 4 residues within 4Å:- Chain H: Q.11, D.69, E.71
- Ligands: GTP.10
1 PLIP interactions:1 interactions with chain H- Metal complexes: H:E.71
MG.14: 3 residues within 4Å:- Chain J: E.71, T.145
- Ligands: GTP.13
2 PLIP interactions:2 interactions with chain J- Metal complexes: J:E.71, J:E.71
MG.17: 3 residues within 4Å:- Chain L: E.71, T.145
- Ligands: GTP.16
1 PLIP interactions:1 interactions with chain L- Metal complexes: L:E.71
- 6 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
GDP.3: 14 residues within 4Å:- Chain B: G.10, Q.11, C.12, Q.15, E.69, S.138, G.141, G.142, T.143, G.144, D.177, N.204, Y.222, N.226
13 PLIP interactions:13 interactions with chain B- Hydrogen bonds: B:Q.11, B:C.12, B:E.69, B:S.138, B:T.143, B:T.143, B:G.144, B:D.177, B:N.204, B:N.226, B:N.226, B:N.226
- pi-Stacking: B:Y.222
GDP.6: 14 residues within 4Å:- Chain D: G.10, Q.11, C.12, Q.15, E.69, S.138, G.141, G.142, T.143, G.144, D.177, N.204, Y.222, N.226
12 PLIP interactions:12 interactions with chain D- Hydrogen bonds: D:Q.11, D:Q.11, D:E.69, D:S.138, D:T.143, D:G.144, D:D.177, D:N.204, D:N.204, D:N.226, D:N.226
- pi-Stacking: D:Y.222
GDP.9: 13 residues within 4Å:- Chain F: G.10, Q.11, C.12, S.138, G.141, G.142, T.143, G.144, N.204, L.207, Y.222, L.225, N.226
14 PLIP interactions:14 interactions with chain F- Hydrogen bonds: F:Q.11, F:Q.11, F:C.12, F:G.13, F:S.138, F:G.141, F:T.143, F:G.144, F:D.177, F:N.204, F:N.204, F:Y.222, F:N.226
- pi-Cation interactions: F:Y.222
GDP.12: 13 residues within 4Å:- Chain I: G.10, Q.11, C.12, Q.15, S.138, G.141, G.142, T.143, G.144, D.177, N.204, Y.222, N.226
15 PLIP interactions:15 interactions with chain I- Hydrogen bonds: I:Q.11, I:Q.11, I:C.12, I:Q.15, I:S.138, I:G.141, I:T.143, I:T.143, I:G.144, I:D.177, I:N.204, I:N.204, I:N.226, I:N.226
- pi-Cation interactions: I:Y.222
GDP.15: 17 residues within 4Å:- Chain H: L.248, E.254
- Chain K: G.10, Q.11, C.12, D.67, N.99, S.138, G.141, G.142, T.143, G.144, D.177, E.181, N.204, Y.222, N.226
16 PLIP interactions:16 interactions with chain K- Hydrogen bonds: K:Q.11, K:Q.11, K:C.12, K:N.99, K:S.138, K:G.141, K:T.143, K:T.143, K:T.143, K:G.144, K:D.177, K:E.181, K:N.204, K:N.204, K:N.226, K:N.226
GDP.18: 14 residues within 4Å:- Chain J: E.254
- Chain M: G.10, Q.11, C.12, D.67, S.138, G.141, G.142, T.143, G.144, D.177, N.204, Y.222, N.226
11 PLIP interactions:11 interactions with chain M- Hydrogen bonds: M:Q.11, M:C.12, M:S.138, M:G.141, M:T.143, M:T.143, M:G.144, M:D.177, M:N.204, M:Y.222, M:N.226
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ichikawa, M. et al., Tubulin lattice in cilia is in a stressed form regulated by microtubule inner proteins. Proc.Natl.Acad.Sci.USA (2019)
- Release Date
- 2019-09-25
- Peptides
- Tubulin alpha chain: ACEHJL
Tubulin beta chain: BDFIKM
Protofilament ribbon protein: G - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CC
DE
EH
FJ
GL
HB
BD
IF
JI
KK
LM
MG
A
SMTL ID : 6u0u.1
Protofilament Ribbon Flagellar Proteins Rib43a-L
Tubulin alpha chain
Toggle Identical (ACEHJL)Tubulin beta chain
Toggle Identical (BDFIKM)Protofilament ribbon protein
Related Entries With Identical Sequence
6u0h.1 | 6u0t.1 | 7moq.1 | 7mwg.1 | 7n32.1 | 7pje.1 | 7pje.2 | 8g2z.38 | 8g2z.61 | 8g2z.110 | 8g2z.111 | 8g2z.112 | 8g2z.113 | 8g2z.114 | 8g2z.115 | 8g2z.116 | 8g2z.117 | 8g2z.118 | 8g2z.119 | 8g2z.120 | 8g2z.121 | 8g2z.122 | 8g2z.123 | 8g2z.124 | 8g2z.125 | 8g2z.126 | 8g2z.127 | 8g2z.128 | 8g2z.129 | 8g2z.130 more...less...8g2z.131 | 8g2z.132 | 8g2z.133 | 8g2z.134 | 8g2z.135 | 8g2z.136 | 8g2z.137 | 8g2z.138 | 8g2z.139 | 8g2z.140 | 8g2z.141 | 8g2z.142 | 8g2z.143 | 8g2z.144 | 8g2z.145 | 8g2z.146 | 8g2z.147 | 8g2z.148 | 8g2z.149 | 8g2z.150 | 8g2z.151 | 8g2z.152 | 8g2z.153 | 8g2z.154 | 8g2z.155 | 8g2z.156 | 8g2z.157 | 8g2z.158 | 8g2z.159 | 8g2z.160 | 8g2z.161 | 8g2z.162 | 8g2z.163 | 8g2z.164 | 8g2z.165 | 8g2z.166 | 8g2z.167 | 8g2z.168 | 8g2z.169 | 8g2z.170 | 8g2z.171 | 8g2z.172 | 8g2z.173 | 8g2z.174 | 8g2z.175 | 8g2z.176 | 8g2z.177 | 8g2z.178 | 8g2z.179 | 8g2z.180 | 8g2z.181 | 8g2z.182 | 8g2z.183 | 8g2z.184 | 8g2z.185 | 8g2z.186 | 8g2z.187 | 8g2z.188 | 8g2z.189 | 8g2z.190 | 8g2z.191 | 8g2z.192 | 8g2z.193 | 8g2z.194 | 8g2z.195 | 8g2z.196 | 8g2z.197 | 8g2z.198 | 8g2z.199 | 8g2z.200 | 8g2z.201 | 8g2z.202 | 8g2z.203 | 8g2z.204 | 8g2z.205 | 8g2z.206 | 8g2z.207 | 8g2z.208 | 8g2z.209 | 8g2z.210 | 8g2z.211 | 8g2z.212 | 8g2z.213 | 8g2z.214 | 8g2z.215 | 8g2z.216 | 8g2z.217 | 8g2z.218 | 8g2z.219 | 8g2z.220 | 8g2z.221 | 8g2z.222 | 8g2z.223 | 8g2z.224 | 8g2z.225 | 8g2z.226 | 8g2z.227 | 8g2z.228 | 8g2z.229 | 8g2z.230 | 8g2z.231 | 8g2z.232 | 8g2z.233 | 8g2z.234 | 8g2z.235 | 8g2z.236 | 8g2z.237 | 8g2z.238 | 8g2z.239 | 8g2z.240 | 8g2z.241 | 8g2z.242 | 8g2z.243 | 8g2z.244 | 8g2z.245 | 8g2z.246 | 8g2z.247 | 8g2z.248 | 8g2z.249 | 8g2z.250 | 8g2z.251 | 8g2z.252 | 8g2z.253 | 8g2z.254 | 8g2z.255 | 8g2z.256 | 8g2z.257 | 8g2z.258 | 8g2z.259 | 8g2z.260 | 8g2z.261 | 8g2z.262 | 8g2z.263 | 8g2z.264 | 8g2z.265 | 8g2z.266 | 8g2z.267 | 8g2z.268 | 8g2z.269 | 8g2z.270 | 8g2z.271 | 8g2z.272 | 8g2z.273 | 8g2z.274 | 8g2z.275 | 8g2z.276 | 8g2z.277 | 8g2z.278 | 8g2z.279 | 8g2z.280 | 8g2z.281 | 8g2z.282 | 8g2z.283 | 8g2z.284 | 8g2z.285 | 8g2z.286 | 8g2z.287 | 8g2z.288 | 8g2z.289 | 8g2z.290 | 8g2z.291 | 8g2z.292 | 8g2z.293 | 8g2z.294 | 8g2z.295 | 8g2z.296 | 8g2z.297 | 8g2z.298 | 8g2z.299 | 8g2z.300 | 8g2z.301 | 8g2z.302 | 8g2z.303 | 8g2z.304 | 8g2z.305 | 8g2z.306 | 8g2z.307 | 8g2z.308 | 8g2z.309 | 8g2z.310 | 8g2z.311 | 8g2z.312 | 8g2z.313 | 8g2z.314 | 8g2z.315 | 8g2z.316 | 8g2z.317 | 8g2z.318 | 8g2z.319 | 8g2z.320 | 8g2z.321 | 8g2z.322 | 8g2z.323 | 8g2z.324 | 8g2z.325 | 8g2z.326 | 8g2z.327 | 8g2z.328 | 8g2z.329 | 8g2z.330 | 8g2z.331 | 8g2z.332 | 8g2z.333 | 8g2z.334 | 8g2z.335 | 8g2z.336 | 8g2z.337 | 8g2z.338 | 8g2z.339 | 8g2z.340 | 8g2z.341 | 8g2z.342 | 8g2z.343 | 8g2z.344 | 8g2z.345 | 8g2z.346 | 8g2z.347 | 8g2z.348 | 8g2z.349 | 8g2z.350 | 8g2z.351 | 8g2z.352 | 8g2z.353 | 8g2z.354 | 8g2z.355 | 8g2z.356 | 8g2z.357 | 8g2z.358 | 8g2z.359 | 8g2z.360 | 8g2z.361 | 8g2z.362 | 8g2z.363 | 8g2z.364 | 8g2z.365 | 8g2z.366 | 8g2z.367 | 8g2z.368 | 8g2z.369 | 8g2z.370 | 8g2z.371 | 8g2z.372 | 8g2z.373 | 8g2z.374 | 8g2z.375 | 8g2z.376 | 8g2z.377 | 8g2z.378 | 8g2z.379 | 8g2z.380 | 8g2z.381 | 8g2z.382 | 8g2z.383 | 8g2z.384 | 8g2z.385 | 8g2z.386 | 8g2z.387 | 8g2z.388 | 8g2z.389 | 8g2z.390 | 8g2z.391 | 8g2z.392 | 8g2z.393 | 8g2z.394 | 8g2z.395 | 8g2z.396 | 8g2z.397 | 8g2z.398 | 8g2z.399 | 8g2z.400 | 8g2z.401 | 8g2z.402 | 8g2z.403 | 8g2z.404 | 8g2z.405 | 8g2z.406 | 8g2z.407 | 8g2z.408 | 8g2z.409 | 8g2z.410 | 8g2z.411 | 8g2z.412 | 8g2z.413 | 8g2z.414 | 8g2z.415 | 8g2z.416 | 8g2z.417 | 8g2z.418 | 8g2z.419 | 8g2z.420 | 8g2z.421 | 8g2z.422 | 8g2z.423 | 8g2z.424 | 8g2z.425 | 8g2z.426 | 8g2z.427 | 8g2z.428 | 8g2z.429 | 8g2z.430 | 8g2z.431 | 8g3d.38 | 8g3d.61 | 8g3d.111 | 8g3d.113 | 8g3d.115 | 8g3d.117 | 8g3d.119 | 8g3d.121 | 8g3d.123 | 8g3d.125 | 8g3d.127 | 8g3d.129 | 8g3d.131 | 8g3d.133 | 8g3d.135 | 8g3d.137 | 8g3d.139 | 8g3d.141 | 8g3d.143 | 8g3d.145 | 8g3d.147 | 8g3d.149 | 8g3d.151 | 8g3d.153 | 8g3d.155 | 8g3d.157 | 8g3d.159 | 8g3d.161 | 8g3d.163 | 8g3d.165 | 8g3d.167 | 8g3d.169 | 8g3d.171 | 8g3d.173 | 8g3d.175 | 8g3d.177 | 8g3d.179 | 8g3d.181 | 8g3d.183 | 8g3d.185 | 8g3d.187 | 8g3d.189 | 8g3d.191 | 8g3d.193 | 8g3d.195 | 8g3d.197 | 8g3d.199 | 8g3d.201 | 8g3d.203 | 8g3d.205 | 8g3d.207 | 8g3d.209 | 8g3d.211 | 8g3d.213 | 8g3d.215 | 8g3d.217 | 8g3d.219 | 8g3d.221 | 8g3d.223 | 8g3d.225 | 8g3d.227 | 8g3d.229 | 8g3d.231 | 8g3d.233 | 8g3d.235 | 8g3d.237 | 8g3d.239 | 8g3d.241 | 8g3d.243 | 8g3d.245 | 8g3d.247 | 8g3d.249 | 8g3d.251 | 8g3d.253 | 8g3d.255 | 8g3d.257 | 8g3d.259 | 8g3d.261 | 8g3d.263 | 8g3d.265 | 8g3d.267 | 8g3d.269 | 8g3d.271 | 8g3d.273 | 8g3d.275 | 8g3d.277 | 8g3d.279 | 8g3d.281 | 8g3d.283 | 8g3d.285 | 8g3d.287 | 8g3d.289 | 8g3d.291 | 8g3d.293 | 8g3d.295 | 8g3d.297 | 8g3d.299 | 8g3d.301 | 8g3d.303 | 8g3d.305 | 8g3d.307 | 8g3d.309 | 8g3d.311 | 8g3d.313 | 8g3d.315 | 8g3d.317 | 8g3d.319 | 8g3d.321 | 8g3d.323 | 8g3d.325 | 8g3d.327 | 8g3d.329 | 8g3d.331 | 8g3d.333 | 8g3d.335 | 8g3d.337 | 8g3d.339 | 8g3d.341 | 8g3d.343 | 8g3d.345 | 8g3d.347 | 8g3d.349 | 8g3d.351 | 8g3d.353 | 8g3d.355 | 8g3d.357 | 8g3d.359 | 8g3d.361 | 8g3d.363 | 8g3d.365 | 8g3d.367 | 8g3d.369 | 8g3d.371 | 8g3d.373 | 8g3d.375 | 8g3d.377 | 8g3d.379 | 8g3d.381 | 8g3d.383 | 8g3d.385 | 8g3d.387 | 8g3d.389 | 8g3d.391 | 8g3d.393 | 8g3d.395 | 8g3d.397 | 8g3d.399 | 8g3d.401 | 8g3d.403 | 8g3d.405 | 8g3d.407 | 8g3d.409 | 8g3d.411 | 8g3d.413 | 8g3d.415 | 8g3d.417 | 8g3d.419 | 8g3d.421 | 8g3d.423 | 8g3d.425 | 8g3d.427 | 8g3d.429 | 8g3d.431