SMTL ID : 6u3t.1 (2 other biounits)

Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.79 Å

Oligo State

monomer

Ligands

2 x PQJ: fos-choline-14(Non-covalent)

PQJ.1: 9 residues within 4Å: Chain A: N.176, Q.177, W.179, Y.182, Q.194, M.197, K.198, T.199, R.200 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.200, A:N.201 pi-Cation interactions: A:W.179 PQJ.2: 7 residues within 4Å: Chain A: A.73, N.74, G.202, S.203, M.204, W.260, W.265 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.203 pi-Cation interactions: A:W.260, A:W.260

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: Y.182, N.188, Q.194, R.200 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.182, A:N.188, A:Q.194 Salt bridges: A:R.200 SO4.4: 2 residues within 4Å: Chain A: T.109, K.110 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, J. et al., Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence. J.Biol.Chem. (2020)

Release Date

2020-03-25

Peptides

Alpha-hemolysin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-hemolysin

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