SMTL ID : 6u6u.1

IL36R extracellular domain in complex with BI655130 Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.31 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 7 residues within 4Å: Chain C: N.21, C.22, T.23, T.28, S.29, T.58, W.59 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:T.58 Hydrogen bonds: C:T.28

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: Y.101 Chain C: F.93 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.101, A:Y.101

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 4 residues within 4Å: Chain C: K.8, E.10, V.72, N.89 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:E.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Larson, E.T. et al., X-ray crystal structure localizes the mechanism of inhibition of an IL-36R antagonist monoclonal antibody to interaction with Ig1 and Ig2 extra cellular domains. Protein Sci. (2020)

Release Date

2020-04-22

Peptides

BI00655130 Fab heavy chain: A
BI00655130 Fab light chain: B
Interleukin-1 receptor-like 2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
R

BI00655130 Fab heavy chain

BI00655130 Fab light chain

Interleukin-1 receptor-like 2