SMTL ID : 6u98.1

Hsp90a NTD K58R bound reversibly to sulfonyl fluoride 6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x Q2D: 3-{[(3R)-3-({6-amino-8-[(6-iodo-2H-1,3-benzodioxol-5-yl)sulfanyl]-9H-purin-9-yl}methyl)piperidin-1-yl]methyl}benzene-1-sulfonyl fluoride(Non-covalent)

Q2D.1: 18 residues within 4Å: Chain A: N.70, S.71, A.74, D.112, I.115, G.116, M.117, L.122, L.126, I.129, A.130, F.153, G.154, F.157, Y.158, V.169, W.181, T.203 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.126, A:I.129, A:I.129 Hydrogen bonds: A:N.70, A:D.112, A:T.203 Water bridges: A:S.71, A:G.114, A:G.116 pi-Stacking: A:F.157

1 x K: POTASSIUM ION(Non-covalent)

K.2: 5 residues within 4Å: Chain A: I.100, N.102, T.107, L.108, T.109 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:I.100, A:T.107, A:T.109, H2O.10

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cuesta, A. et al., Ligand Conformational Bias Drives Enantioselective Modification of a Surface-Exposed Lysine on Hsp90. J.Am.Chem.Soc. (2020)

Release Date

2020-02-19

Peptides

Heat shock protein HSP 90-alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Heat shock protein HSP 90-alpha

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