SMTL ID : 6uax.2 (1 other biounit)

Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from Sorangium cellulosum (ScGH128_II)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 7 residues within 4Å: Chain A: N.174, E.175, Q.181, H.246, E.281, F.316, N.322 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:N.174, A:N.174, A:E.281 Water bridges: A:E.175, A:E.175, A:Q.181, A:N.322, A:N.322, A:N.322

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 3 residues within 4Å: Chain A: D.256, Q.258, D.299 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.256, A:D.299, H2O.2, H2O.6, H2O.10

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: F.273, D.274, K.275 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Santos, C.R. et al., Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. (2020)

Release Date

2020-05-20

Peptides

Hypothetical serine rich protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Hypothetical serine rich protein

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