SMTL ID : 6ub0.1

Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with laminaribiose at -2 and -1 subsites

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x GLC- BGC: beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose(Non-covalent)

GLC-BGC.1: 12 residues within 4Å: Chain A: N.10, W.29, W.47, R.50, N.74, E.75, Q.81, H.142, H.144, E.176, F.209, F.210 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.10, A:W.47, A:W.47, A:R.50, A:N.74, A:Q.81, A:N.74, A:N.74, A:Q.81, A:E.176 Water bridges: A:E.30 Salt bridges: A:H.144

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Santos, C.R. et al., Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. (2020)

Release Date

2020-05-20

Peptides

Glyco_hydro_cc domain-containing protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glyco_hydro_cc domain-containing protein