SMTL ID : 6ubh.2 (3 other biounits)

Structure of the MM7 Erbin PDZ variant in complex with a high-affinity peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x PHE- ASP- PHE- TRP- VAL: peptide(Non-covalent)

PHE-ASP-PHE-TRP-VAL.1: 13 residues within 4Å: Chain A: E.14, L.15, G.16, F.17, S.18, I.19, S.20, R.26, T.40, R.41, M.71, V.75, L.78 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:L.15, A:F.17, A:I.19, A:R.41, A:V.75, A:L.78 Hydrogen bonds: A:L.15, A:G.16, A:F.17, A:F.17, A:F.17, A:S.18, A:I.19, A:I.19, A:T.40 Water bridges: A:G.27, A:R.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Teyra, J. et al., Comprehensive Assessment of the Relationship Between Site -2 Specificity and Helix alpha 2 in the Erbin PDZ Domain. J.Mol.Biol. (2021)

Release Date

2020-07-29

Peptides

Erbin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Erbin

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