SMTL ID : 6unw.1

Epoxide hydrolase from an endophytic Streptomyces

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.21 Å

Oligo State

homo-hexamer

Ligands

6 x CAC: CACODYLATE ION(Non-covalent)

CAC.1: 7 residues within 4Å: Chain A: F.46, D.114, W.115, Y.163, F.188, Y.251, S.283 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.251 CAC.5: 7 residues within 4Å: Chain B: F.46, D.114, Y.163, F.206, Y.251, S.283, H.312 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Y.163 Water bridges: B:F.46 CAC.7: 7 residues within 4Å: Chain C: F.46, D.114, W.115, Y.163, Y.251, S.283, H.312 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:Y.251 CAC.9: 7 residues within 4Å: Chain D: F.46, D.114, W.115, Y.163, F.188, Y.251, S.283 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:Y.163 CAC.13: 7 residues within 4Å: Chain E: F.46, D.114, Y.163, F.206, Y.251, S.283, H.312 2 PLIP interactions: 2 interactions with chain E Hydrogen bonds: E:Y.251 Water bridges: E:F.46 CAC.15: 7 residues within 4Å: Chain F: F.46, D.114, W.115, Y.163, Y.251, S.283, H.312 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:Y.163

10 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain B: R.179 Ligand excluded by PLIP CL.3: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.4: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.6: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.8: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.10: 1 residues within 4Å: Chain E: R.179 Ligand excluded by PLIP CL.11: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.12: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.14: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.16: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tormet-Gonzalez, G.D. et al., An epoxide hydrolase from endophytic Streptomyces shows unique structural features and wide biocatalytic activity. Acta Crystallogr D Struct Biol (2020)

Release Date

2020-09-16

Peptides

Soluble epoxide hydrolase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

Soluble epoxide hydrolase