SMTL ID : 6up4.1

Crystal structure of the murine DHX36 helicase in complex with ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 14 residues within 4Å: Chain A: F.44, T.73, G.74, C.75, G.76, K.77, T.78, T.79, R.116, F.378, T.400, D.402, R.446 Ligands: MG.2 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:G.74, A:C.75, A:G.76, A:K.77, A:T.78, A:T.78, A:T.79, A:T.400 Water bridges: A:K.77, A:K.77, A:T.78, A:R.116, A:E.176 Salt bridges: A:K.77 pi-Stacking: A:F.378, A:F.378 pi-Cation interactions: A:R.116

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: T.78, D.175, E.176 Ligands: ADP.1 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.78, A:E.176, H2O.1, H2O.2, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Srinivasan, S. et al., Function of Auxiliary Domains of the DEAH/RHA Helicase DHX36 in RNA Remodeling. J.Mol.Biol. (2020)

Release Date

2020-04-15

Peptides

Dhx36 protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dhx36 protein

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