SMTL ID : 6uqd.2 (1 other biounit)

Co-complex of S. pyogenes 10782 streptopain bound with a SuFEx-based optimized small molecule inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

monomer

Ligands

1 x QF4: benzyl [(1S)-2-(3-{[(4-carbamoylpiperidin-1-yl)(fluoro)oxo-lambda~6~-sulfanylidene]amino}phenyl)-1-cyanoethyl]carbamate(Non-covalent)

QF4.1: 15 residues within 4Å: Chain A: Q.136, G.165, C.166, V.167, S.253, S.254, G.255, S.256, A.257, Q.306, G.307, V.308, G.312, G.313, H.314 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Q.306, A:Q.306, A:V.308 Hydrogen bonds: A:Q.136, A:C.166, A:S.256, A:G.313, A:G.313 Water bridges: A:V.167, A:V.167, A:S.254

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kitamura, S. et al., Sulfur(VI) Fluoride Exchange (SuFEx)-Enabled High-Throughput Medicinal Chemistry. J.Am.Chem.Soc. (2020)

Release Date

2020-08-26

Peptides

Streptopain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Streptopain

Related Entries With Identical Sequence