SMTL ID : 6utu.1

Crystal structure of minor pseudopilin ternary complex of XcpVWX from the Type 2 secretion system of Pseudomonas aeruginosa in the P3 space group

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

hetero-3-3-3-mer

Ligands

9 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain C: D.22, V.34, D.35, E.39 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:D.22, C:D.22, C:V.34, C:D.35, C:E.39 CA.2: 6 residues within 4Å: Chain C: D.109, D.112, D.114, N.116, Q.118, E.124 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:D.109, C:D.112, C:D.112, C:D.114, C:N.116 CA.3: 5 residues within 4Å: Chain C: D.109, D.112, D.114, E.124, N.139 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:D.109, C:D.112, C:D.112, C:D.114, C:E.124 CA.4: 4 residues within 4Å: Chain F: D.22, V.34, D.35, E.39 3 PLIP interactions: 3 interactions with chain F Metal complexes: F:D.22, F:V.34, F:D.35 CA.5: 5 residues within 4Å: Chain F: D.109, D.112, D.114, N.116, E.124 5 PLIP interactions: 5 interactions with chain F Metal complexes: F:D.109, F:D.112, F:D.114, F:N.116, F:E.124 CA.6: 5 residues within 4Å: Chain F: D.109, D.112, D.114, E.124, N.139 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:D.109, F:D.112, F:D.114, F:E.124 CA.7: 4 residues within 4Å: Chain I: D.22, V.34, D.35, E.39 5 PLIP interactions: 5 interactions with chain I Metal complexes: I:D.22, I:D.22, I:V.34, I:D.35, I:E.39 CA.8: 5 residues within 4Å: Chain I: D.109, D.112, D.114, N.116, E.124 5 PLIP interactions: 5 interactions with chain I Metal complexes: I:D.109, I:D.112, I:D.112, I:D.114, I:N.116 CA.9: 5 residues within 4Å: Chain I: D.109, D.112, D.114, E.124, N.139 5 PLIP interactions: 5 interactions with chain I Metal complexes: I:D.109, I:D.112, I:D.112, I:D.114, I:E.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., In Situ Proteolysis Condition-Induced Crystallization of the XcpVWX Complex in Different Lattices. Int J Mol Sci (2020)

Release Date

2020-09-02

Peptides

Type II secretion system protein I: ADG
Type II secretion system protein J: BEH
Type II secretion system protein K: CFI

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
D

G
G

B
B

E
E

H
H

C
C

F
F

I
I

Type II secretion system protein I

Type II secretion system protein J

Type II secretion system protein K

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