SMTL ID : 6uwa.1

Mouse PKC C1B and C2 domains

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

4 x PB: LEAD (II) ION(Non-covalent)

PB.1: 5 residues within 4Å: Chain A: D.88, D.94, D.147, W.148, D.149 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.88, A:D.94, A:D.147, A:W.148, A:D.149 PB.2: 6 residues within 4Å: Chain A: M.87, D.88, D.147, D.149, D.155 Ligands: CIT.8 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:M.87, A:D.88, A:D.147, A:D.149, A:D.155 PB.3: 7 residues within 4Å: Chain A: C.19, C.44, M.87, D.155 Ligands: CIT.8, CIT.9, ZN.10 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.155 PB.4: 6 residues within 4Å: Chain A: D.149, T.152, R.153, D.155 Ligands: CIT.8, CIT.9 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.149, A:R.153, A:D.155

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 5 residues within 4Å: Chain A: R.140, F.162, G.163, E.166, N.188 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.163, A:N.188 Water bridges: A:R.140 Salt bridges: A:R.140 SO4.6: 2 residues within 4Å: Chain A: R.60, N.180 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.180, A:N.180 Water bridges: A:R.60 Salt bridges: A:R.60 SO4.7: 3 residues within 4Å: Chain A: T.152, R.153, N.154 5 PLIP interactions: 5 interactions with chain A Water bridges: A:R.153, A:N.154, A:N.154, A:N.154 Salt bridges: A:R.153

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.8: 12 residues within 4Å: Chain A: Q.43, C.44, M.87, D.88, P.89, D.149, T.152, D.155 Ligands: PB.2, PB.3, PB.4, CIT.9 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Q.43, A:P.89 Hydrogen bonds: A:D.88, A:T.152 Water bridges: A:M.87, A:D.88 CIT.9: 13 residues within 4Å: Chain A: C.19, S.21, Y.24, H.41, Q.43, C.44, T.152, R.153, D.155 Ligands: PB.3, PB.4, CIT.8, ZN.10 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.24 Hydrogen bonds: A:S.21, A:Q.43, A:T.152, A:R.153 Salt bridges: A:H.41

2 x ZN: ZINC ION(Non-covalent)

ZN.10: 6 residues within 4Å: Chain A: C.16, C.19, H.41, C.44 Ligands: PB.3, CIT.9 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.16, A:C.19, A:H.41, A:C.44 ZN.11: 4 residues within 4Å: Chain A: H.3, C.33, C.36, C.52 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.3, A:C.33, A:C.36, A:C.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Igumenova, T., Mouse PKC C1B and C2 domains. To Be Published

Release Date

2020-12-09

Peptides

Protein kinase C: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein kinase C