SMTL ID : 6uwf.1

GltPh in complex with L-aspartate and sodium ions in outward-facing state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x ASP: ASPARTIC ACID(Non-covalent)

ASP.1: 16 residues within 4Å: Chain A: R.276, S.277, S.278, T.314, T.352, A.353, G.354, V.355, P.356, G.357, A.358, G.359, D.394, R.397, T.398, N.401 10 PLIP interactions: 9 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:T.352 Hydrogen bonds: A:S.278, A:T.314, A:G.357, A:A.358, A:G.359, A:D.394, A:N.401, D.1 Salt bridges: A:R.397

2 x 6OU: [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate(Non-covalent)(Covalent)

6OU.2: 11 residues within 4Å: Chain A: L.90, P.128, L.130, I.133, L.134, L.152, I.309, L.347, I.350, G.351, M.362 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.90, A:I.133, A:L.134, A:L.152 6OU.3: 11 residues within 4Å: Chain A: L.3, Y.4, Y.7, L.53, K.196, I.197, G.200, V.201, Q.203, Y.204, I.207 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.3, A:Y.4, A:Y.7, A:Y.7, A:L.53, A:V.201, A:Q.203, A:Y.204, A:I.207 Hydrogen bonds: A:Y.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, Y. et al., Use of paramagnetic 19 F NMR to monitor domain movement in a glutamate transporter homolog. Nat.Chem.Biol. (2020)

Release Date

2020-06-03

Peptides

Glutamate transporter homolog: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Glutamate transporter homolog

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