SMTL ID : 6uxm.1 (2 other biounits)

Crystal structure of BAK core domain BH3-groove-dimer in complex with E. coli lipid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

homo-dimer

Ligands

2 x PEE: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine(Non-covalent)

PEE.1: 7 residues within 4Å: Chain A: N.23, Y.73, R.74 Chain B: I.60, N.61, W.62, V.65 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:Y.73, B:V.65 Hydrogen bonds: A:N.23, B:W.62 Salt bridges: A:R.74 PEE.2: 8 residues within 4Å: Chain A: I.60, N.61, W.62, V.65 Chain B: N.23, L.69, Y.73, R.74 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:V.65, B:L.69 Hydrogen bonds: A:W.62, B:N.23 Salt bridges: B:R.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cowan, A.D. et al., BAK core dimers bind lipids and can be bridged by them. Nat.Struct.Mol.Biol. (2020)

Release Date

2020-09-02

Peptides

Bcl-2 homologous antagonist/killer: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bcl-2 homologous antagonist/killer

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