- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-pentamer
- Ligands
- 10 x 3CN: 3-AMINOPROPANE(Non-covalent)(Non-functional Binders)
3CN.1: 3 residues within 4Å:- Chain A: A.244
- Ligands: 3CN.3, 3CN.9
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:A.244
3CN.2: 9 residues within 4Å:- Chain A: E.77, E.131, P.132, F.133, Y.175, L.178, F.188
- Chain E: Y.38, N.103
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain E- Hydrophobic interactions: A:L.178, A:F.188, E:Y.38
- Hydrogen bonds: A:E.77, A:P.132
3CN.3: 2 residues within 4Å:- Ligands: 3CN.1, 3CN.5
No protein-ligand interaction detected (PLIP)3CN.4: 9 residues within 4Å:- Chain A: Y.38, N.103
- Chain B: E.77, E.131, P.132, F.133, Y.175, L.178, F.188
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:L.178, A:Y.38
- Hydrogen bonds: B:E.77, B:E.131
3CN.5: 2 residues within 4Å:- Ligands: 3CN.3, 3CN.7
No protein-ligand interaction detected (PLIP)3CN.6: 7 residues within 4Å:- Chain B: Y.38, N.103
- Chain C: E.77, E.131, P.132, F.133, L.178
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain B- Hydrophobic interactions: C:L.178, B:Y.38
- Hydrogen bonds: C:P.132
3CN.7: 4 residues within 4Å:- Chain C: F.247
- Chain D: F.247
- Ligands: 3CN.5, 3CN.9
No protein-ligand interaction detected (PLIP)3CN.8: 6 residues within 4Å:- Chain C: Y.38
- Chain D: E.77, E.131, P.132, F.133, L.178
4 PLIP interactions:3 interactions with chain D, 1 interactions with chain C- Hydrophobic interactions: D:L.178, C:Y.38
- Hydrogen bonds: D:E.77, D:E.131
3CN.9: 2 residues within 4Å:- Ligands: 3CN.1, 3CN.7
No protein-ligand interaction detected (PLIP)3CN.10: 8 residues within 4Å:- Chain D: Y.38, N.103
- Chain E: E.77, E.131, P.132, F.133, L.178, F.188
4 PLIP interactions:3 interactions with chain E, 1 interactions with chain D- Hydrophobic interactions: E:L.178, D:Y.38
- Hydrogen bonds: E:E.77, E:P.132
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kumar, P. et al., Cryo-EM structures of a lipid-sensitive pentameric ligand-gated ion channel embedded in a phosphatidylcholine-only bilayer. Proc.Natl.Acad.Sci.USA (2020)
- Release Date
- 2020-01-15
- Peptides
- Gamma-aminobutyric-acid receptor subunit beta-1: ABCDE
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
E - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-pentamer
- Ligands
- 10 x 3CN: 3-AMINOPROPANE(Non-covalent)(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kumar, P. et al., Cryo-EM structures of a lipid-sensitive pentameric ligand-gated ion channel embedded in a phosphatidylcholine-only bilayer. Proc.Natl.Acad.Sci.USA (2020)
- Release Date
- 2020-01-15
- Peptides
- Gamma-aminobutyric-acid receptor subunit beta-1: ABCDE
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
E - Membrane
-
We predict this structure to be a membrane protein.