SMTL ID : 6v0v.1

Cryo-EM structure of mouse WT RAG1/2 NFC complex (DNA0)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.336, D.444 Chain D: A.16, C.17 Ligands: CA.2 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.336, A:D.444 CA.2: 4 residues within 4Å: Chain A: D.336, E.698 Chain D: C.17 Ligands: CA.1 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.336, A:E.698

1 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain A: C.463, C.466, H.673, H.678 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.463, A:C.466, A:H.673, A:H.678

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, X. et al., Cutting antiparallel DNA strands in a single active site. Nat.Struct.Mol.Biol. (2020)

Release Date

2020-01-29

Peptides

V(D)J recombination-activating protein 1: A
V(D)J recombination-activating protein 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

V(D)J recombination-activating protein 1

V(D)J recombination-activating protein 2

Related Entries With Identical Sequence