SMTL ID : 6v1e.1

Crystal structure of the bromodomain of human BRD7 bound to BI7273

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x 5SW: 4-[4-[(dimethylamino)methyl]-3,5-dimethoxy-phenyl]-2-methyl-2,7-naphthyridin-1-one(Non-covalent)

5SW.1: 13 residues within 4Å: Chain A: S.29, A.30, F.31, F.32, F.34, P.35, V.36, I.40, A.41, A.83, Y.86, N.87, Y.93 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.87 pi-Stacking: A:Y.93, A:Y.93

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: I.47, I.48, K.49, H.50, L.78, N.82 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.47, A:K.49, A:H.50, A:H.50, A:N.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karim, R.M. et al., Structural Basis of Inhibitor Selectivity in the BRD7/9 Subfamily of Bromodomains. J.Med.Chem. (2020)

Release Date

2020-03-11

Peptides

Bromodomain-containing protein 7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 7

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