SMTL ID : 6v7n.2 (1 other biounit)

Crystal Structure of a human Lysosome Resident Glycoprotein, Lysosomal Acid Lipase, and its Implications in Cholesteryl Ester Storage Disease (CESD)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.62 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 7 residues within 4Å: Chain A: D.9, Y.22, W.23, L.78, N.252, S.254, R.255 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.22

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 4 residues within 4Å: Chain A: N.15, E.18, E.29, W.104 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:W.104 Hydrogen bonds: A:N.15, A:E.18, A:E.29, A:E.29 NAG.3: 2 residues within 4Å: Chain A: N.140, K.141 No protein-ligand interaction detected (PLIP)

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 5 residues within 4Å: Chain A: Q.301, Y.303, P.304, P.305, T.306 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.301, A:Y.303, A:T.306 SO4.5: 2 residues within 4Å: Chain A: S.112, V.113 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.112, A:V.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rajamohan, F. et al., Crystal structure of human lysosomal acid lipase and its implications in cholesteryl ester storage disease. J.Lipid Res. (2020)

Release Date

2020-06-17

Peptides

Lysosomal acid lipase/cholesteryl ester hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Lysosomal acid lipase/cholesteryl ester hydrolase

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