SMTL ID : 6v8g.1

GltPh mutant - Y204L A345V V366A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.38 Å

Oligo State

homo-trimer

Ligands

9 x NA: SODIUM ION(Non-functional Binders)

NA.1: 7 residues within 4Å: Chain A: S.278, G.306, A.307, N.310, M.311, N.401, D.405 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.278, A:G.306 NA.2: 5 residues within 4Å: Chain A: T.308, M.311, S.349, I.350, T.352 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.350, A:T.352 NA.4: 5 residues within 4Å: Chain A: Y.89, T.92, S.93, N.310, D.312 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.93, A:N.310 NA.5: 7 residues within 4Å: Chain B: S.278, G.306, A.307, N.310, M.311, N.401, D.405 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.278, B:D.405 NA.6: 5 residues within 4Å: Chain B: T.308, M.311, S.349, I.350, T.352 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:I.350, B:T.352 NA.8: 5 residues within 4Å: Chain B: Y.89, T.92, S.93, N.310, D.312 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.93, B:N.310 NA.9: 7 residues within 4Å: Chain C: S.278, G.306, A.307, N.310, M.311, N.401, D.405 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:S.278, C:S.278 NA.10: 5 residues within 4Å: Chain C: T.308, M.311, S.349, I.350, T.352 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:I.350, C:T.352 NA.12: 5 residues within 4Å: Chain C: Y.89, T.92, S.93, N.310, D.312 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:S.93, C:M.311, C:D.312

3 x ASP: ASPARTIC ACID(Non-covalent)

ASP.3: 16 residues within 4Å: Chain A: R.276, S.277, S.278, M.311, T.314, T.352, A.353, G.354, V.355, G.357, A.358, G.359, D.394, R.397, T.398, N.401 11 PLIP interactions: 9 interactions with chain A, 2 Ligand-Ligand interactions Hydrophobic interactions: A:T.352 Hydrogen bonds: A:R.276, A:S.278, A:V.355, A:G.357, A:G.359, A:T.398, A:N.401, D.3, D.3 Salt bridges: A:R.397 ASP.7: 16 residues within 4Å: Chain B: R.276, S.277, S.278, M.311, T.314, T.352, A.353, G.354, V.355, G.357, A.358, G.359, D.394, R.397, T.398, N.401 11 PLIP interactions: 9 interactions with chain B, 2 Ligand-Ligand interactions Hydrophobic interactions: B:T.352 Hydrogen bonds: B:R.276, B:S.278, B:V.355, B:G.357, B:G.359, B:T.398, B:N.401, D.7, D.7 Salt bridges: B:R.397 ASP.11: 16 residues within 4Å: Chain C: R.276, S.277, S.278, M.311, T.314, T.352, A.353, G.354, V.355, G.357, A.358, G.359, D.394, R.397, T.398, N.401 9 PLIP interactions: 8 interactions with chain C, 1 Ligand-Ligand interactions Hydrophobic interactions: C:T.352 Hydrogen bonds: C:S.278, C:V.355, C:G.357, C:G.359, C:T.398, C:N.401, D.11 Salt bridges: C:R.397

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huysmans, G.H.M. et al., The high-energy transition state of the glutamate transporter homologue GltPh. Embo J. (2021)

Release Date

2020-11-18

Peptides

Glutamate transporter homolog: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Membrane

We predict this structure to be a membrane protein.
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Glutamate transporter homolog