SMTL ID : 6v90.1

Crystal structure of the p300 acetyltransferase domain with AcCoA competitive inhibitor 12

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.04 Å

Oligo State

monomer

Ligands

1 x QSD: (2R)-2-{[2-(4-cyanophenyl)ethyl]amino}-N-[5-(1-methyl-1H-pyrazol-4-yl)pyridin-2-yl]-2-phenylacetamide(Non-covalent)

QSD.1: 20 residues within 4Å: Chain A: L.113, D.114, S.115, Y.129, C.153, P.154, P.155, G.158, D.159, D.160, Y.161, H.166, P.167, Q.170, I.172, P.173, R.177, L.178, W.181 Ligands: CL.4 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:L.113, A:Y.129, A:Y.129, A:Y.161, A:H.166, A:Q.170, A:I.172, A:I.172, A:P.173, A:L.178, A:W.181 Hydrogen bonds: A:D.114, A:S.115, A:S.115, A:G.158, A:Q.170 pi-Stacking: A:H.166, A:W.181

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: A.65, E.66, S.67 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.66, A:S.67 SO4.3: 2 residues within 4Å: Chain A: R.193, H.196 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.193, A:H.196

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 4 residues within 4Å: Chain A: Y.112, L.113, Y.161 Ligands: QSD.1 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huhn, A.J. et al., Early Drug-Discovery Efforts towards the Identification of EP300/CBP Histone Acetyltransferase (HAT) Inhibitors. Chemmedchem (2020)

Release Date

2020-04-01

Peptides

Histone acetyltransferase p300: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone acetyltransferase p300

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