SMTL ID : 6vbh.1 (1 other biounit)

Human XPG endonuclease catalytic domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

15 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: D.206, N.208, K.209, H.243, G.244 Ligand excluded by PLIP SO4.2: 7 residues within 4Å: Chain A: Q.3, G.4, K.7, L.217, G.229, C.230, V.231 Ligand excluded by PLIP SO4.3: 1 residues within 4Å: Chain A: R.329 Ligand excluded by PLIP SO4.4: 6 residues within 4Å: Chain A: L.82, K.83, K.84, Y.221, T.222, E.223 Ligand excluded by PLIP SO4.5: 4 residues within 4Å: Chain A: R.178, Y.196, V.197, H.200 Ligand excluded by PLIP SO4.6: 7 residues within 4Å: Chain A: W.33, L.34, Q.36, H.53, T.56, L.57, R.60 Ligand excluded by PLIP SO4.7: 4 residues within 4Å: Chain A: W.254, D.270, K.274, R.278 Ligand excluded by PLIP SO4.8: 5 residues within 4Å: Chain A: Q.3, I.225, P.226, T.227, V.228 Ligand excluded by PLIP SO4.9: 2 residues within 4Å: Chain A: P.141, Y.142 Ligand excluded by PLIP SO4.10: 1 residues within 4Å: Chain A: R.329 Ligand excluded by PLIP SO4.11: 3 residues within 4Å: Chain A: L.55, T.56, H.59 Ligand excluded by PLIP SO4.12: 9 residues within 4Å: Chain A: L.65, I.69, R.70, F.138, W.309, G.310, K.311, P.312, L.343 Ligand excluded by PLIP SO4.13: 5 residues within 4Å: Chain A: R.90, A.93, R.94, T.121, R.122 Ligand excluded by PLIP SO4.14: 2 residues within 4Å: Chain A: R.94, R.122 Ligand excluded by PLIP SO4.15: 2 residues within 4Å: Chain A: E.133, R.136 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsutakawa, S.E. et al., Human XPG nuclease structure, assembly, and activities with insights for neurodegeneration and cancer from pathogenic mutations. Proc.Natl.Acad.Sci.USA (2020)

Release Date

2020-06-17

Peptides

DNA repair protein complementing XP-G cells,Flap endonuclease 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA repair protein complementing XP-G cells,Flap endonuclease 1

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