SMTL ID : 6vbi.2 (1 other biounit)

crystal structure of PDE5 in complex with a non-competitive inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x FZA: (13bS)-4,9-dimethoxy-14-methyl-8,13,13b,14-tetrahydroindolo[2',3':3,4]pyrido[2,1-b]quinazolin-5(7H)-one(Non-covalent)

FZA.1: 14 residues within 4Å: Chain A: D.29, F.30, A.77, N.80, R.82, H.83, N.86, T.87, C.229, D.230, S.232, A.233, K.236, I.244 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.30, A:R.82, A:R.82, A:N.86, A:A.233, A:K.236, A:I.244 Hydrogen bonds: A:D.29, A:N.80 Water bridges: A:A.233

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, T. et al., Identification of a novel allosteric pocket and its regulation mechanism. To Be Published

Release Date

2021-01-20

Peptides

cGMP-specific 3',5'-cyclic phosphodiesterase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

cGMP-specific 3',5'-cyclic phosphodiesterase

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