SMTL ID : 6vbw.1

Cryo-EM structure of Cascade-TniQ-dsDNA ternary complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-6-1-2-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain L: C.128, L.130, C.131, C.150, H.153 3 PLIP interactions: 3 interactions with chain L Metal complexes: L:C.128, L:C.131, L:H.153 ZN.2: 3 residues within 4Å: Chain L: C.161, C.178, C.181 2 PLIP interactions: 2 interactions with chain L Metal complexes: L:C.161, L:C.181 ZN.3: 4 residues within 4Å: Chain M: C.131, N.135, H.151, H.153 1 PLIP interactions: 1 interactions with chain M Metal complexes: M:C.131 ZN.4: 5 residues within 4Å: Chain M: C.161, C.181, E.183, P.184, I.185 2 PLIP interactions: 2 interactions with chain M Metal complexes: M:E.183, M:P.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jia, N. et al., Structure-function insights into the initial step of DNA integration by a CRISPR-Cas-Transposon complex. Cell Res. (2020)

Release Date

2020-01-29

Peptides

Cas8: D
Cas7: EFGHIJ
Cas6: K
TniQ: LM

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

D
A

E
B

F
C

G
D

H
F

I
E

J
G

K
H

L
I

M
J

Cas8

Cas7

Cas6

TniQ

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