SMTL ID : 6vcu.4 (3 other biounits)

Homo sapiens FKBP12 protein bound with APX879 in P32 space group

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 4 residues within 4Å: Chain A: H.29, N.47, K.48, P.49 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:H.29

1 x R27: N'-[(3S,4R,5S,8R,9E,12S,14S,15R,16S,18R,19R,26aS)-5,19-dihydroxy-3-{(1E)-1-[(1R,3R,4R)-4-hydroxy-3-methoxycyclohexyl]prop-1-en-2-yl}-14,16-dimethoxy-4,10,12,18-tetramethyl-1,20,21-trioxo-8-(prop-2-en-1-yl)-1,3,4,5,6,8,11,12,13,14,15,16,17,18,19,20,21,23,24,25,26,26a-docosahydro-7H-15,19-epoxypyrido[2,1-c][1,4]oxazacyclotricosin-7-ylidene]acetohydrazide(Non-covalent)

R27.2: 15 residues within 4Å: Chain A: Y.30, F.40, D.41, R.46, F.50, E.58, V.59, I.60, W.63, A.85, Y.86, H.91, I.94, I.95, F.103 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.30, A:F.50, A:F.50, A:F.50, A:F.50, A:I.60, A:W.63, A:W.63, A:I.95 Hydrogen bonds: A:Y.30, A:D.41, A:I.60, A:Y.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gobeil, S.M. et al., Leveraging Fungal and Human Calcineurin-Inhibitor Structures, Biophysical Data, and Dynamics To Design Selective and Nonimmunosuppressive FK506 Analogs. Mbio (2021)

Release Date

2020-12-16

Peptides

Peptidyl-prolyl cis-trans isomerase FKBP1A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Peptidyl-prolyl cis-trans isomerase FKBP1A

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