SMTL ID : 6vea.1

Structure of the Glutamate-Like Receptor GLR3.2 ligand-binding domain in complex with Glycine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.58 Å

Oligo State

monomer

Ligands

1 x GLY: GLYCINE(Non-covalent)

GLY.1: 9 residues within 4Å: Chain A: F.130, D.148, I.149, A.150, R.155, S.199, Y.200, E.240, Y.243 8 PLIP interactions: 7 interactions with chain A, 1 Ligand-Ligand interactions Hydrogen bonds: A:D.148, A:A.150, A:Y.200, A:Y.243, A:Y.243, G.1 Water bridges: A:R.79 Salt bridges: A:R.155

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain A: S.221, P.222, K.223 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.221, A:K.223

2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.3: 6 residues within 4Å: Chain A: D.78, R.79, A.80, K.83, R.88, G.124 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.88 Water bridges: A:D.78 BME.4: 3 residues within 4Å: Chain A: K.94, V.95, F.118 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gangwar, S.P. et al., Structure of the Arabidopsis Glutamate Receptor-like Channel GLR3.2 Ligand-Binding Domain. Structure (2021)

Release Date

2020-09-23

Peptides

Glutamate receptor 3.2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glutamate receptor 3.2

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