SMTL ID : 6vej.1

TriABC transporter from Pseudomonas aeruginosa

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-3-mer

Ligands

3 x LMU: DODECYL-ALPHA-D-MALTOSIDE(Non-covalent)

LMU.1: 4 residues within 4Å: Chain A: E.382, Y.383 Chain B: F.465, L.864 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:F.465, B:F.465 Hydrogen bonds: A:E.382 LMU.2: 4 residues within 4Å: Chain B: E.382, Y.383 Chain C: F.465, L.864 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain C Hydrogen bonds: B:E.382 Hydrophobic interactions: C:F.465, C:F.465 LMU.3: 4 residues within 4Å: Chain A: F.465, L.864 Chain C: E.382, Y.383 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain C Hydrophobic interactions: A:F.465, A:F.465 Hydrogen bonds: C:E.382

3 x E2V: (2R)-2-(hexadecanoyloxy)propyl nonadecanoate(Covalent)

E2V.4: 2 residues within 4Å: Chain D: C.1 Ligands: PLM.5 No protein-ligand interaction detected (PLIP) E2V.6: 2 residues within 4Å: Chain E: C.1 Ligands: PLM.7 No protein-ligand interaction detected (PLIP) E2V.8: 2 residues within 4Å: Chain F: C.1 Ligands: PLM.9 No protein-ligand interaction detected (PLIP)

3 x PLM: PALMITIC ACID(Covalent)

PLM.5: 3 residues within 4Å: Chain D: C.1, G.2 Ligands: E2V.4 No protein-ligand interaction detected (PLIP) PLM.7: 3 residues within 4Å: Chain E: C.1, G.2 Ligands: E2V.6 No protein-ligand interaction detected (PLIP) PLM.9: 3 residues within 4Å: Chain F: C.1, G.2 Ligands: E2V.8 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fabre, L. et al., A "Drug Sweeping" State of the TriABC Triclosan Efflux Pump from Pseudomonas aeruginosa. Structure (2021)

Release Date

2020-09-30

Peptides

Probable Resistance-Nodulation-Cell Division (RND) efflux transporter: ABC
Probable Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein,Probable Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein: DEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
P

E
Q

F
R

Membrane

We predict this structure to be a membrane protein.
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Probable Resistance-Nodulation-Cell Division (RND) efflux transporter

Probable Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein,Probable Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein