SMTL ID : 6vfy.1

Crystal structure of mouse acyl-CoA thioesterase 7 with CoA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-trimer

Ligands

3 x COA: COENZYME A(Non-covalent)

COA.1: 20 residues within 4Å: Chain A: L.74, A.75, R.76, S.102, K.103, H.104, S.105, W.131, V.133, V.143, Y.164, Q.167, R.171, V.215, G.217, N.249, F.250, H.251, D.252, K.253 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:A.75, A:F.250 Hydrogen bonds: A:L.74, A:L.74, A:S.102, A:K.103, A:H.104, A:S.105, A:Q.167, A:R.171, A:N.249, A:F.250 Salt bridges: A:H.104 pi-Cation interactions: A:R.171, A:R.171 COA.2: 23 residues within 4Å: Chain B: E.51, A.73, L.74, A.75, R.76, S.102, K.103, H.104, S.105, W.131, V.133, L.135, V.143, Y.164, Q.167, R.171, V.215, G.217, N.249, F.250, H.251, D.252, K.253 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:A.75, B:L.135, B:F.250 Hydrogen bonds: B:S.102, B:K.103, B:H.104, B:S.105, B:Q.167, B:R.171, B:R.171, B:N.249, B:F.250 Salt bridges: B:H.104 pi-Cation interactions: B:R.171, B:R.171 COA.3: 22 residues within 4Å: Chain C: E.51, L.74, A.75, R.76, S.102, H.104, S.105, W.131, V.133, L.135, V.143, Y.164, Q.167, R.171, F.214, V.215, G.217, N.249, F.250, H.251, D.252, K.253 17 PLIP interactions: 17 interactions with chain C Hydrophobic interactions: C:A.75, C:V.133, C:L.135, C:F.250 Hydrogen bonds: C:S.102, C:S.102, C:H.104, C:H.104, C:Y.164, C:Y.164, C:Q.167, C:R.171, C:N.249, C:F.250 Salt bridges: C:H.104 pi-Cation interactions: C:R.171, C:R.171

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.4: 3 residues within 4Å: Chain C: S.270, N.271, Y.335 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:N.271, C:N.271, C:Y.335

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Teakel, S.L. et al., Crystal structure of mouse acyl-CoA thioesterase 7 with CoA. To Be Published

Release Date

2020-01-29

Peptides

Cytosolic acyl coenzyme A thioester hydrolase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

Cytosolic acyl coenzyme A thioester hydrolase