SMTL ID : 6vgi.1 (1 other biounit)

Crystal Structures of FLAP bound to MK-866

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.61 Å

Oligo State

homo-trimer

Ligands

3 x QY7: 3-[3-(tert-butylsulfanyl)-1-[(4-chlorophenyl)methyl]-5-(propan-2-yl)-1H-indol-2-yl]-2,2-dimethylpropanoic acid(Non-covalent)

QY7.1: 12 residues within 4Å: Chain A: V.22, V.23, G.26, F.27, A.29, H.30 Chain C: T.68, I.115, K.118, I.121, L.122, F.125 6 PLIP interactions: 3 interactions with chain A, 3 interactions with chain C Hydrophobic interactions: A:V.22, A:A.29, A:H.30, C:T.68, C:I.121, C:F.125 QY7.3: 13 residues within 4Å: Chain A: A.65, T.68, I.115, K.118, I.121, L.122, F.125 Chain B: V.22, V.23, G.26, F.27, A.29, H.30 10 PLIP interactions: 7 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:A.65, A:T.68, A:I.115, A:I.121, A:L.122, A:F.125, B:V.22, B:A.29, B:H.30 Salt bridges: A:K.118 QY7.5: 10 residues within 4Å: Chain B: I.115, F.116, K.118, L.122, F.125 Chain C: V.22, V.23, G.26, F.27, H.30 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:I.115, B:K.118, B:L.122, B:F.125 Salt bridges: B:K.118

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: F.116, G.117, K.118, R.119 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.117, A:K.118, A:R.119 SO4.4: 4 residues within 4Å: Chain B: F.116, G.117, K.118, R.119 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.117, B:K.118, B:R.119 SO4.6: 4 residues within 4Å: Chain C: F.116, G.117, K.118, R.119 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:G.117, C:K.118, C:R.119 Salt bridges: C:R.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ho, J.D. et al., Structure-based, multi-targeted drug discovery approach to eicosanoid inhibition: Dual inhibitors of mPGES-1 and 5-lipoxygenase activating protein (FLAP). Biochim Biophys Acta Gen Subj (2020)

Release Date

2020-12-02

Peptides

5-lipoxygenase-activating protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
E

C
F

Membrane

We predict this structure to be a membrane protein.
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5-lipoxygenase-activating protein

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