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SMTL ID : 6vj7.1

Crystal structure of red kidney bean purple acid phosphatase in complex with adenosine 5'-(beta,gamma imido)triphosphate

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.60 Å
Oligo State
homo-tetramer
Ligands
1 x NAG- NAG- BMA- BMA: beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA- BMA: beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
2 x NAG- FUC- NAG: alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
4 x ZN: ZINC ION(Non-covalent)
4 x FE: FE (III) ION(Non-covalent)
24 x SO4: SULFATE ION(Non-functional Binders)
9 x GOL: GLYCEROL(Non-functional Binders)
31 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
7 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
7 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
3 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
3 x NA: SODIUM ION(Non-functional Binders)
1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Feder, D. et al., Structural elements that modulate the substrate specificity of plant purple acid phosphatases: Avenues for improved phosphorus acquisition in crops. Plant Sci. (2020)
Release Date
2020-04-29
Peptides
Fe(3+)-Zn(2+) purple acid phosphatase: ABCD
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D

Fe(3+)-Zn(2+) purple acid phosphatase

Related Entries With Identical Sequence

4dhl.1 | 4dhl.2 | 4dsy.1 | 4dsy.2 | 4dt2.1 | 4dt2.2 | 6g46.1 | 6hwr.1 | 6hwr.2 | 6of5.1 | 6of5.2 | 6of5.3