SMTL ID : 6vlt.8 (7 other biounits)

Crystal Structure of Human P450 2C9*2 Genetic Variant in Complex with Losartan

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.12 Å

Oligo State

monomer

Ligands

2 x CM5: 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE(Non-covalent)

CM5.1: 3 residues within 4Å: Chain A: Y.207, F.208 Ligands: CM5.4 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.208 Hydrogen bonds: A:Y.207 CM5.4: 6 residues within 4Å: Chain A: P.209, G.210, T.211, N.213, K.214 Ligands: CM5.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.213, A:K.214

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.2: 23 residues within 4Å: Chain A: R.79, I.94, V.95, W.102, R.106, L.276, A.279, G.280, T.283, T.284, T.287, Q.338, S.347, L.348, H.350, P.409, F.410, S.411, R.415, C.417, G.419, A.423 Ligands: LSN.3 17 PLIP interactions: 17 interactions with chain A, Hydrophobic interactions: A:I.94, A:V.95, A:L.276, A:A.279, A:T.283, A:L.348, A:F.410 Hydrogen bonds: A:V.95, A:S.347, A:S.411, A:S.411 Salt bridges: A:R.79, A:R.79, A:R.106, A:H.350, A:R.415 Metal complexes: A:C.417

1 x LSN: [2-butyl-5-chloranyl-3-[[4-[2-(2H-1,2,3,4-tetrazol-5-yl)phenyl]phenyl]methyl]imidazol-4-yl]methanol(Non-covalent)

LSN.3: 16 residues within 4Å: Chain A: A.85, R.90, L.183, N.186, I.187, L.190, V.219, M.222, V.274, A.279, E.282, T.283, L.344, L.348, F.458 Ligands: HEM.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.85, A:I.187, A:L.190, A:V.219, A:L.344, A:L.348, A:F.458 Hydrogen bonds: A:R.90, A:N.186

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Parikh, S.J. et al., Structure of Cytochrome P450 2C9*2 in Complex with Losartan: Insights into the Effect of Genetic Polymorphism. Mol.Pharmacol. (2020)

Release Date

2020-09-30

Peptides

Cytochrome P450 2C9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

Cytochrome P450 2C9

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