SMTL ID : 6vqm.1

Crystal Structure Analysis of human ACK1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.87 Å

Oligo State

homo-dimer

Ligands

2 x R7P: 2-({4-[(3R,5S)-3,5-dimethylpiperazin-1-yl]-2-methoxyphenyl}amino)-9-methyl-5,7-dihydro-6H-pyrimido[5,4-d][1,3]benzodiazepin-6-one(Non-covalent)

R7P.1: 17 residues within 4Å: Chain A: L.26, G.27, D.28, G.29, V.34, A.50, K.52, I.84, T.99, E.100, L.101, A.102, P.103, G.105, S.106, L.153, D.164 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.26, A:L.26, A:V.34, A:V.34 Hydrogen bonds: A:K.52, A:T.99, A:T.99, A:A.102, A:A.102, A:D.164, A:D.164 R7P.3: 16 residues within 4Å: Chain B: K.25, L.26, G.27, D.28, G.29, V.34, A.50, I.84, T.99, E.100, L.101, A.102, P.103, G.105, L.153, G.163 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.26, B:V.34, B:V.34, B:L.153 Hydrogen bonds: B:T.99, B:A.102, B:A.102, B:G.163

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 7 residues within 4Å: Chain A: R.145, R.169, Y.178, V.179, M.180, Q.181, R.184 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.178, A:Q.181 Salt bridges: A:R.145, A:R.169, A:R.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seo, H.-S. et al., Crystal Structure Analysis of human ACK1. To Be Published

Release Date

2021-02-10

Peptides

Activated CDC42 kinase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Activated CDC42 kinase 1