SMTL ID : 6vr6.1 (1 other biounit)

Structure of ALDH9A1 complexed with NAD+ in space group P1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 25 residues within 4Å: Chain A: I.152, G.153, A.154, W.155, N.156, K.179, S.181, P.182, G.211, A.212, G.215, Q.216, F.229, T.230, G.231, S.232, T.235, K.238, I.239, E.253, L.254, G.255, C.287, E.390, F.392 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:A.154, A:T.230 Hydrogen bonds: A:G.153, A:K.179, A:G.231, A:S.232, A:G.255 pi-Stacking: A:F.392 NAD.2: 20 residues within 4Å: Chain B: I.152, G.153, W.155, K.179, P.180, S.181, P.182, G.210, G.211, A.212, G.215, Q.216, F.229, T.230, G.231, S.232, T.235, K.238, I.239, M.242 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:G.153, B:K.179, B:S.232, B:T.235, B:T.235, B:K.238, B:K.238 NAD.3: 17 residues within 4Å: Chain C: I.152, G.153, W.155, K.179, P.180, S.181, P.182, G.210, G.211, A.212, G.215, Q.216, F.229, G.231, S.232, T.235, I.239 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:G.153, C:K.179, C:Q.216, C:S.232, C:S.232, C:T.235, C:T.235 NAD.4: 17 residues within 4Å: Chain D: I.152, G.153, W.155, K.179, S.181, P.182, G.211, A.212, G.215, Q.216, F.229, T.230, G.231, S.232, T.235, I.239, M.242 7 PLIP interactions: 7 interactions with chain D Hydrogen bonds: D:G.153, D:K.179, D:G.210, D:Q.216, D:S.232, D:S.232, D:T.235

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wyatt, J.W. et al., Inhibition, crystal structures, and in-solution oligomeric structure of aldehyde dehydrogenase 9A1. Arch.Biochem.Biophys. (2020)

Release Date

2020-08-05

Peptides

4-trimethylaminobutyraldehyde dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

4-trimethylaminobutyraldehyde dehydrogenase

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