SMTL ID : 6vto.1

Crystal structure of human Galectin-7 in complex with 4-O-beta-D-Galactopyranosyl-D-glucose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

homo-dimer

Ligands

2 x LBL: (2~{R},3~{R},4~{R},5~{R})-4-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-2,3,5, 6-tetrakis(oxidanyl)hexanal(Non-covalent)

LBL.1: 9 residues within 4Å: Chain A: R.31, H.49, N.51, R.53, V.60, N.62, W.69, E.72, R.74 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:H.49, A:R.53, A:R.53, A:N.62, A:E.72, A:E.72, A:R.74 Water bridges: A:R.31, A:R.31, A:R.31, A:N.51, A:E.72 Salt bridges: A:R.53 LBL.2: 9 residues within 4Å: Chain B: R.31, H.49, N.51, R.53, V.60, N.62, W.69, E.72, R.74 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:N.51, B:R.53, B:R.53, B:N.62, B:E.72, B:E.72, B:R.74 Water bridges: B:R.31, B:R.31, B:N.51, B:R.74 Salt bridges: B:R.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pham, N.T.H. et al., Perturbing dimer interactions and allosteric communication modulates the immunosuppressive activity of human galectin-7. J.Biol.Chem. (2021)

Release Date

2021-08-25

Peptides

Galectin-7: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Galectin-7

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