SMTL ID : 6vxm.1

Cryo-EM structure of Arabidopsis thaliana MSL1

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-heptamer

Ligands

21 x LFA: EICOSANE(Non-covalent)

LFA.1: 6 residues within 4Å: Chain F: L.255, S.263 Chain G: I.250, T.287, T.288 Ligands: LFA.21 Ligand excluded by PLIP LFA.2: 2 residues within 4Å: Chain G: L.251 Ligands: LFA.3 Ligand excluded by PLIP LFA.3: 2 residues within 4Å: Chain A: K.207 Ligands: LFA.2 Ligand excluded by PLIP LFA.4: 6 residues within 4Å: Chain A: I.250, T.287, T.288 Chain G: L.255, F.262, S.263 Ligand excluded by PLIP LFA.5: 2 residues within 4Å: Chain A: L.251 Ligands: LFA.6 Ligand excluded by PLIP LFA.6: 3 residues within 4Å: Chain B: K.207 Ligands: LFA.5, LFA.7 Ligand excluded by PLIP LFA.7: 7 residues within 4Å: Chain A: L.255, F.262, S.263 Chain B: I.250, T.287, T.288 Ligands: LFA.6 Ligand excluded by PLIP LFA.8: 2 residues within 4Å: Chain B: L.251 Ligands: LFA.9 Ligand excluded by PLIP LFA.9: 3 residues within 4Å: Chain C: K.207 Ligands: LFA.8, LFA.10 Ligand excluded by PLIP LFA.10: 6 residues within 4Å: Chain B: L.255, S.263 Chain C: I.250, T.287, T.288 Ligands: LFA.9 Ligand excluded by PLIP LFA.11: 2 residues within 4Å: Chain C: L.251 Ligands: LFA.12 Ligand excluded by PLIP LFA.12: 3 residues within 4Å: Chain D: K.207 Ligands: LFA.11, LFA.13 Ligand excluded by PLIP LFA.13: 6 residues within 4Å: Chain C: L.255, S.263 Chain D: I.250, T.287, T.288 Ligands: LFA.12 Ligand excluded by PLIP LFA.14: 2 residues within 4Å: Chain D: L.251 Ligands: LFA.15 Ligand excluded by PLIP LFA.15: 2 residues within 4Å: Chain E: K.207 Ligands: LFA.14 Ligand excluded by PLIP LFA.16: 6 residues within 4Å: Chain D: L.255, F.262, S.263 Chain E: I.250, T.287, T.288 Ligand excluded by PLIP LFA.17: 2 residues within 4Å: Chain E: L.251 Ligands: LFA.18 Ligand excluded by PLIP LFA.18: 3 residues within 4Å: Chain F: K.207 Ligands: LFA.17, LFA.19 Ligand excluded by PLIP LFA.19: 7 residues within 4Å: Chain E: L.255, F.262, S.263 Chain F: I.250, T.287, T.288 Ligands: LFA.18 Ligand excluded by PLIP LFA.20: 2 residues within 4Å: Chain F: L.251 Ligands: LFA.21 Ligand excluded by PLIP LFA.21: 3 residues within 4Å: Chain G: K.207 Ligands: LFA.1, LFA.20 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Deng, Z. et al., Structural mechanism for gating of a eukaryotic mechanosensitive channel of small conductance. Nat Commun (2020)

Release Date

2020-08-05

Peptides

Mechanosensitive ion channel protein 1, mitochondrial: ABCDEFG

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

Mechanosensitive ion channel protein 1, mitochondrial

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