6w3k.1 | SWISS-MODEL Template Library

SMTL ID : 6w3k.1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

homo-dimer

Ligands

2 x SJS: 4-[5-[2,6-bis(fluoranyl)phenyl]-2~{H}-pyrazolo[3,4-b]pyridin-3-yl]-2-(4-oxidanylpiperidin-1-yl)-1~{H}-pyrimidin-6-one(Non-covalent)

SJS.1:	20 residues within 4Å: Chain A: L.31, G.32, H.33, V.40, A.51, K.53, E.66, I.80, I.96, E.97, L.98, C.99, A.100, A.101, T.102, E.105, H.146, L.149, S.164, D.165 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.96, A:L.149 Hydrogen bonds: A:C.99, A:D.165, A:D.165 Water bridges: A:K.53
SJS.2:	20 residues within 4Å: Chain B: L.31, G.32, H.33, V.40, A.51, K.53, E.66, I.80, I.96, E.97, L.98, C.99, A.100, A.101, T.102, E.105, H.146, L.149, S.164, D.165 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:I.96, B:L.149 Hydrogen bonds: B:C.99, B:D.165, B:D.165 Water bridges: B:K.53

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Ferri, E. et al., Activation of the IRE1 RNase through remodeling of the kinase front pocket by ATP-competitive ligands. Nat Commun (2020)

Release Date

2020-12-09

Peptides

Serine/threonine-protein kinase/endoribonuclease IRE1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A