SMTL ID : 6w5f.2 (3 other biounits)

Class D beta-lactamase BSU-2 delta mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

2 x MLI: MALONATE ION(Non-functional Binders)

MLI.1: 7 residues within 4Å: Chain A: S.76, K.79, E.123, S.124, K.214, T.215, G.216 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.76, A:T.215, A:T.217 Water bridges: A:S.76 Salt bridges: A:K.79, A:K.214, A:K.214 MLI.2: 7 residues within 4Å: Chain A: L.55, A.183, K.198, Y.212, F.227, K.229, S.234 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.227 Hydrogen bonds: A:Y.212, A:S.234 Salt bridges: A:K.198, A:K.198

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 5 residues within 4Å: Chain A: V.89, K.90, A.91, D.135, R.140 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.140, A:R.140 Water bridges: A:A.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stewart, N.K. et al., A surface loop modulates activity of the Bacillus class D beta-lactamases. J.Struct.Biol. (2020)

Release Date

2020-06-24

Peptides

BSU-2delta mutant: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

BSU-2delta mutant

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