SMTL ID : 6w74.1

Structure of cIAP with compound 15

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.11 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.53, C.56, H.73, C.80 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.53, A:C.56, A:H.73, A:C.80

1 x TKY: 14-{[(3S)-2-(N-methyl-L-alanyl-3-methyl-L-valyl)-3-{[(1R)-1,2,3,4-tetrahydronaphthalen-1-yl]carbamoyl}-1,2,3,4-tetrahydroisoquinolin-7-yl]oxy}-3,6,9,12-tetraoxatetradecan-1-yl (3R)-3-{5-amino-4-carbamoyl-3-[4-(2,4-difluorophenoxy)phenyl]-1H-pyrazol-1-yl}piperidine-1-carboxylate(Non-covalent)

TKY.2: 11 residues within 4Å: Chain A: D.50, K.52, G.59, L.60, R.61, C.62, W.63, D.67, E.72, W.76, F.77 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:D.50, A:W.63, A:W.76, A:W.76, A:F.77 Hydrogen bonds: A:G.59, A:R.61, A:R.61, A:D.67, A:E.72 pi-Cation interactions: A:R.61

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Calabrese, M.F. et al., Structural Characterization of BTK:PROTAC:cIAP Ternary Complexes: From Snapshots to Ensembles. Nat.Chem.Biol. (2020)

Release Date

2020-11-18

Peptides

Baculoviral IAP repeat-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Baculoviral IAP repeat-containing protein 2

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