SMTL ID : 6waq.1 (1 other biounit)

Crystal structure of the SARS-CoV-1 RBD bound by the cross-reactive single-domain antibody SARS VHH-72

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain B: G.7, F.10, N.11 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:F.10 Hydrogen bonds: B:N.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wrapp, D. et al., Structural Basis for Potent Neutralization of Betacoronaviruses by Single-Domain Camelid Antibodies. Cell (2020)

Release Date

2020-04-01

Peptides

nanobody SARS VHH-72: A
Spike glycoprotein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

nanobody SARS VHH-72

Spike glycoprotein

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