SMTL ID : 6wb6.1 (1 other biounit)

2.05 A resolution structure of transferrin 1 from Manduca sexta

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 8 residues within 4Å: Chain A: F.88, V.254, S.267, W.268, A.269, K.335, A.336, N.337 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:V.254

1 x FE: FE (III) ION(Non-covalent)

FE.2: 5 residues within 4Å: Chain A: Y.90, Y.204, R.271 Ligands: CO3.3, CO3.4 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:Y.90, A:Y.204

2 x CO3: CARBONATE ION(Non-functional Binders)

CO3.3: 7 residues within 4Å: Chain A: Y.90, R.120, N.121, Y.204, R.271 Ligands: FE.2, CO3.4 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.271 CO3.4: 9 residues within 4Å: Chain A: Y.90, T.116, R.120, N.121, V.122, G.123, Y.204 Ligands: FE.2, CO3.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.122, A:G.123

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weber, J.J. et al., Structural insight into the novel iron-coordination and domain interactions of transferrin-1 from a model insect, Manduca sexta. Protein Sci. (2021)

Release Date

2020-11-25

Peptides

Transferrin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transferrin

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