SMTL ID : 6wbn.1

Cryo-EM structure of human Pannexin 1 channel N255A mutant, gap junction

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-14-mer

Ligands

28 x PTY: PHOSPHATIDYLETHANOLAMINE(Non-covalent)

PTY.1: 13 residues within 4Å: Chain A: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Chain B: L.52, L.275, I.279 Ligands: CLR.5, PTY.9 Ligand excluded by PLIP PTY.2: 9 residues within 4Å: Chain A: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Chain G: W.104 Ligands: PTY.38 Ligand excluded by PLIP PTY.8: 13 residues within 4Å: Chain B: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Chain C: L.52, L.275, I.279 Ligands: CLR.11, PTY.15 Ligand excluded by PLIP PTY.9: 9 residues within 4Å: Chain A: W.104 Chain B: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Ligands: PTY.1 Ligand excluded by PLIP PTY.14: 13 residues within 4Å: Chain C: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Chain D: L.52, L.275, I.279 Ligands: CLR.17, PTY.21 Ligand excluded by PLIP PTY.15: 9 residues within 4Å: Chain B: W.104 Chain C: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Ligands: PTY.8 Ligand excluded by PLIP PTY.20: 13 residues within 4Å: Chain D: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Chain E: L.52, L.275, I.279 Ligands: CLR.23, PTY.27 Ligand excluded by PLIP PTY.21: 9 residues within 4Å: Chain C: W.104 Chain D: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Ligands: PTY.14 Ligand excluded by PLIP PTY.26: 13 residues within 4Å: Chain E: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Chain F: L.52, L.275, I.279 Ligands: CLR.29, PTY.33 Ligand excluded by PLIP PTY.27: 9 residues within 4Å: Chain D: W.104 Chain E: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Ligands: PTY.20 Ligand excluded by PLIP PTY.32: 13 residues within 4Å: Chain F: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Chain G: L.52, L.275, I.279 Ligands: CLR.35, PTY.39 Ligand excluded by PLIP PTY.33: 9 residues within 4Å: Chain E: W.104 Chain F: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Ligands: PTY.26 Ligand excluded by PLIP PTY.38: 13 residues within 4Å: Chain A: L.52, L.275, I.279 Chain G: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Ligands: PTY.2, CLR.41 Ligand excluded by PLIP PTY.39: 9 residues within 4Å: Chain F: W.104 Chain G: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Ligands: PTY.32 Ligand excluded by PLIP PTY.43: 13 residues within 4Å: Chain H: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Chain I: L.52, L.275, I.279 Ligands: CLR.46, PTY.50 Ligand excluded by PLIP PTY.44: 9 residues within 4Å: Chain H: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Chain N: W.104 Ligands: PTY.80 Ligand excluded by PLIP PTY.49: 13 residues within 4Å: Chain I: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Chain J: L.52, L.275, I.279 Ligands: CLR.52, PTY.56 Ligand excluded by PLIP PTY.50: 9 residues within 4Å: Chain H: W.104 Chain I: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Ligands: PTY.43 Ligand excluded by PLIP PTY.55: 13 residues within 4Å: Chain J: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Chain K: L.52, L.275, I.279 Ligands: CLR.58, PTY.62 Ligand excluded by PLIP PTY.56: 9 residues within 4Å: Chain I: W.104 Chain J: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Ligands: PTY.49 Ligand excluded by PLIP PTY.61: 13 residues within 4Å: Chain K: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Chain L: L.52, L.275, I.279 Ligands: CLR.64, PTY.68 Ligand excluded by PLIP PTY.62: 9 residues within 4Å: Chain J: W.104 Chain K: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Ligands: PTY.55 Ligand excluded by PLIP PTY.67: 13 residues within 4Å: Chain L: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Chain M: L.52, L.275, I.279 Ligands: CLR.70, PTY.74 Ligand excluded by PLIP PTY.68: 9 residues within 4Å: Chain K: W.104 Chain L: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Ligands: PTY.61 Ligand excluded by PLIP PTY.73: 13 residues within 4Å: Chain M: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Chain N: L.52, L.275, I.279 Ligands: CLR.76, PTY.81 Ligand excluded by PLIP PTY.74: 9 residues within 4Å: Chain L: W.104 Chain M: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Ligands: PTY.67 Ligand excluded by PLIP PTY.80: 13 residues within 4Å: Chain H: L.52, L.275, I.279 Chain N: G.99, N.100, L.101, W.104, Y.111, I.112, L.115, F.116 Ligands: PTY.44, CLR.83 Ligand excluded by PLIP PTY.81: 9 residues within 4Å: Chain M: W.104 Chain N: F.235, L.237, S.239, Q.274, L.275, V.278, V.282 Ligands: PTY.73 Ligand excluded by PLIP

14 x 3PE: 1,2-Distearoyl-sn-glycerophosphoethanolamine(Non-covalent)

3PE.3: 9 residues within 4Å: Chain A: V.34, M.37, Y.293, R.300, E.336 Chain G: F.126, S.215, L.219 Ligands: DGA.4 8 PLIP interactions: 5 interactions with chain A, 3 interactions with chain G Hydrophobic interactions: A:V.34, A:Y.293, G:F.126, G:F.126, G:L.219 Hydrogen bonds: A:Y.293, A:E.336 Salt bridges: A:R.300 3PE.10: 10 residues within 4Å: Chain A: F.126, F.129, S.215, L.219 Chain B: V.34, M.37, Y.293, R.300, E.336 Ligands: DGA.7 11 PLIP interactions: 6 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:F.126, A:F.126, A:F.126, A:F.126, A:F.129, A:L.219, B:V.34, B:Y.293 Hydrogen bonds: B:Y.293, B:E.336 Salt bridges: B:R.300 3PE.16: 10 residues within 4Å: Chain B: F.126, F.129, S.215, L.219 Chain C: V.34, M.37, Y.293, R.300, E.336 Ligands: DGA.13 10 PLIP interactions: 5 interactions with chain B, 5 interactions with chain C Hydrophobic interactions: B:F.126, B:F.126, B:F.126, B:F.129, B:L.219, C:V.34, C:Y.293 Hydrogen bonds: C:Y.293, C:E.336 Salt bridges: C:R.300 3PE.22: 10 residues within 4Å: Chain C: F.126, F.129, S.215, L.219 Chain D: V.34, M.37, Y.293, R.300, E.336 Ligands: DGA.19 10 PLIP interactions: 5 interactions with chain C, 5 interactions with chain D Hydrophobic interactions: C:F.126, C:F.126, C:F.126, C:F.129, C:L.219, D:V.34, D:Y.293 Hydrogen bonds: D:Y.293, D:E.336 Salt bridges: D:R.300 3PE.28: 10 residues within 4Å: Chain D: F.126, F.129, S.215, L.219 Chain E: V.34, M.37, Y.293, R.300, E.336 Ligands: DGA.25 10 PLIP interactions: 5 interactions with chain D, 5 interactions with chain E Hydrophobic interactions: D:F.126, D:F.126, D:F.126, D:F.129, D:L.219, E:V.34, E:Y.293 Hydrogen bonds: E:Y.293, E:E.336 Salt bridges: E:R.300 3PE.34: 10 residues within 4Å: Chain E: F.126, F.129, S.215, L.219 Chain F: V.34, M.37, Y.293, R.300, E.336 Ligands: DGA.31 10 PLIP interactions: 5 interactions with chain E, 5 interactions with chain F Hydrophobic interactions: E:F.126, E:F.126, E:F.126, E:F.129, E:L.219, F:V.34, F:Y.293 Hydrogen bonds: F:Y.293, F:E.336 Salt bridges: F:R.300 3PE.40: 10 residues within 4Å: Chain F: F.126, F.129, S.215, L.219 Chain G: V.34, M.37, Y.293, R.300, E.336 Ligands: DGA.37 10 PLIP interactions: 5 interactions with chain G, 5 interactions with chain F Hydrophobic interactions: G:V.34, G:Y.293, F:F.126, F:F.126, F:F.126, F:F.129, F:L.219 Hydrogen bonds: G:Y.293, G:E.336 Salt bridges: G:R.300 3PE.45: 10 residues within 4Å: Chain H: V.34, M.37, Y.293, R.300, E.336 Chain N: F.126, F.129, S.215, L.219 Ligands: DGA.79 8 PLIP interactions: 4 interactions with chain N, 4 interactions with chain H Hydrophobic interactions: N:F.126, N:F.126, N:F.129, N:L.219, H:V.34, H:Y.293 Hydrogen bonds: H:E.336 Salt bridges: H:R.300 3PE.51: 10 residues within 4Å: Chain H: F.126, F.129, S.215, L.219 Chain I: V.34, M.37, Y.293, R.300, E.336 Ligands: DGA.48 8 PLIP interactions: 4 interactions with chain H, 4 interactions with chain I Hydrophobic interactions: H:F.126, H:F.126, H:F.129, H:L.219, I:V.34, I:Y.293 Hydrogen bonds: I:E.336 Salt bridges: I:R.300 3PE.57: 10 residues within 4Å: Chain I: F.126, F.129, S.215, L.219 Chain J: V.34, M.37, Y.293, R.300, E.336 Ligands: DGA.54 8 PLIP interactions: 4 interactions with chain I, 4 interactions with chain J Hydrophobic interactions: I:F.126, I:F.126, I:F.129, I:L.219, J:V.34, J:Y.293 Hydrogen bonds: J:E.336 Salt bridges: J:R.300 3PE.63: 10 residues within 4Å: Chain J: F.126, F.129, S.215, L.219 Chain K: V.34, M.37, Y.293, R.300, E.336 Ligands: DGA.60 8 PLIP interactions: 4 interactions with chain K, 4 interactions with chain J Hydrophobic interactions: K:V.34, K:Y.293, J:F.126, J:F.126, J:F.129, J:L.219 Hydrogen bonds: K:E.336 Salt bridges: K:R.300 3PE.69: 10 residues within 4Å: Chain K: F.126, F.129, S.215, L.219 Chain L: V.34, M.37, Y.293, R.300, E.336 Ligands: DGA.66 8 PLIP interactions: 4 interactions with chain K, 4 interactions with chain L Hydrophobic interactions: K:F.126, K:F.126, K:F.129, K:L.219, L:V.34, L:Y.293 Hydrogen bonds: L:E.336 Salt bridges: L:R.300 3PE.75: 10 residues within 4Å: Chain L: F.126, F.129, S.215, L.219 Chain M: V.34, M.37, Y.293, R.300, E.336 Ligands: DGA.72 8 PLIP interactions: 4 interactions with chain L, 4 interactions with chain M Hydrophobic interactions: L:F.126, L:F.126, L:F.129, L:L.219, M:V.34, M:Y.293 Hydrogen bonds: M:E.336 Salt bridges: M:R.300 3PE.82: 10 residues within 4Å: Chain M: F.126, F.129, S.215, L.219 Chain N: V.34, M.37, Y.293, R.300, E.336 Ligands: DGA.78 8 PLIP interactions: 4 interactions with chain N, 4 interactions with chain M Hydrophobic interactions: N:V.34, N:Y.293, M:F.126, M:F.126, M:F.129, M:L.219 Hydrogen bonds: N:E.336 Salt bridges: N:R.300

14 x DGA: DIACYL GLYCEROL(Non-covalent)

DGA.4: 11 residues within 4Å: Chain A: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Chain G: I.118, L.125, F.129 Ligands: 3PE.3 7 PLIP interactions: 5 interactions with chain A, 2 interactions with chain G Hydrophobic interactions: A:L.17, A:M.37, A:I.41, A:L.287, A:V.290, G:L.125, G:F.129 DGA.7: 11 residues within 4Å: Chain A: I.118, L.125, F.129 Chain B: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Ligands: 3PE.10 8 PLIP interactions: 3 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:L.125, A:F.129, A:F.129, B:L.17, B:M.37, B:I.41, B:L.287, B:V.290 DGA.13: 11 residues within 4Å: Chain B: I.118, L.125, F.129 Chain C: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Ligands: 3PE.16 9 PLIP interactions: 5 interactions with chain C, 4 interactions with chain B Hydrophobic interactions: C:L.17, C:M.37, C:I.41, C:L.287, C:V.290, B:L.125, B:F.129, B:F.129, B:F.129 DGA.19: 11 residues within 4Å: Chain C: I.118, L.125, F.129 Chain D: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Ligands: 3PE.22 9 PLIP interactions: 5 interactions with chain D, 4 interactions with chain C Hydrophobic interactions: D:L.17, D:M.37, D:I.41, D:L.287, D:V.290, C:L.125, C:F.129, C:F.129, C:F.129 DGA.25: 11 residues within 4Å: Chain D: I.118, L.125, F.129 Chain E: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Ligands: 3PE.28 9 PLIP interactions: 5 interactions with chain E, 4 interactions with chain D Hydrophobic interactions: E:L.17, E:M.37, E:I.41, E:L.287, E:V.290, D:L.125, D:F.129, D:F.129, D:F.129 DGA.31: 11 residues within 4Å: Chain E: I.118, L.125, F.129 Chain F: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Ligands: 3PE.34 9 PLIP interactions: 5 interactions with chain F, 4 interactions with chain E Hydrophobic interactions: F:L.17, F:M.37, F:I.41, F:L.287, F:V.290, E:L.125, E:F.129, E:F.129, E:F.129 DGA.37: 11 residues within 4Å: Chain F: I.118, L.125, F.129 Chain G: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Ligands: 3PE.40 9 PLIP interactions: 4 interactions with chain F, 5 interactions with chain G Hydrophobic interactions: F:L.125, F:F.129, F:F.129, F:F.129, G:L.17, G:M.37, G:I.41, G:L.287, G:V.290 DGA.48: 11 residues within 4Å: Chain H: I.118, L.125, F.129 Chain I: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Ligands: 3PE.51 9 PLIP interactions: 4 interactions with chain H, 5 interactions with chain I Hydrophobic interactions: H:L.125, H:F.129, H:F.129, H:F.129, I:L.17, I:M.37, I:I.41, I:L.287, I:V.290 DGA.54: 11 residues within 4Å: Chain I: I.118, L.125, F.129 Chain J: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Ligands: 3PE.57 9 PLIP interactions: 5 interactions with chain J, 4 interactions with chain I Hydrophobic interactions: J:L.17, J:M.37, J:I.41, J:L.287, J:V.290, I:L.125, I:F.129, I:F.129, I:F.129 DGA.60: 11 residues within 4Å: Chain J: I.118, L.125, F.129 Chain K: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Ligands: 3PE.63 9 PLIP interactions: 5 interactions with chain K, 4 interactions with chain J Hydrophobic interactions: K:L.17, K:M.37, K:I.41, K:L.287, K:V.290, J:L.125, J:F.129, J:F.129, J:F.129 DGA.66: 11 residues within 4Å: Chain K: I.118, L.125, F.129 Chain L: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Ligands: 3PE.69 9 PLIP interactions: 5 interactions with chain L, 4 interactions with chain K Hydrophobic interactions: L:L.17, L:M.37, L:I.41, L:L.287, L:V.290, K:L.125, K:F.129, K:F.129, K:F.129 DGA.72: 11 residues within 4Å: Chain L: I.118, L.125, F.129 Chain M: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Ligands: 3PE.75 9 PLIP interactions: 5 interactions with chain M, 4 interactions with chain L Hydrophobic interactions: M:L.17, M:M.37, M:I.41, M:L.287, M:V.290, L:L.125, L:F.129, L:F.129, L:F.129 DGA.78: 11 residues within 4Å: Chain M: I.118, L.125, F.129 Chain N: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Ligands: 3PE.82 9 PLIP interactions: 5 interactions with chain N, 4 interactions with chain M Hydrophobic interactions: N:L.17, N:M.37, N:I.41, N:L.287, N:V.290, M:L.125, M:F.129, M:F.129, M:F.129 DGA.79: 11 residues within 4Å: Chain H: Y.10, L.17, M.37, I.41, L.45, L.287, V.290 Chain N: I.118, L.125, F.129 Ligands: 3PE.45 9 PLIP interactions: 5 interactions with chain H, 4 interactions with chain N Hydrophobic interactions: H:L.17, H:M.37, H:I.41, H:L.287, H:V.290, N:L.125, N:F.129, N:F.129, N:F.129

28 x CLR: CHOLESTEROL(Non-covalent)

CLR.5: 5 residues within 4Å: Chain A: F.116, I.229, Y.230 Ligands: PTY.1, CLR.6 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.116, A:I.229, A:Y.230 CLR.6: 5 residues within 4Å: Chain A: C.228, I.229, Y.233, S.236 Ligands: CLR.5 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.229, A:Y.233 CLR.11: 5 residues within 4Å: Chain B: F.116, I.229, Y.230 Ligands: PTY.8, CLR.12 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:F.116, B:I.229, B:Y.230 CLR.12: 4 residues within 4Å: Chain B: C.228, I.229, S.236 Ligands: CLR.11 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:I.229 CLR.17: 5 residues within 4Å: Chain C: F.116, I.229, Y.230 Ligands: PTY.14, CLR.18 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:F.116, C:I.229, C:Y.230 CLR.18: 5 residues within 4Å: Chain C: C.228, I.229, Y.233, S.236 Ligands: CLR.17 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:I.229, C:Y.233 CLR.23: 5 residues within 4Å: Chain D: F.116, I.229, Y.230 Ligands: PTY.20, CLR.24 3 PLIP interactions: 3 interactions with chain D Hydrophobic interactions: D:F.116, D:I.229, D:Y.230 CLR.24: 5 residues within 4Å: Chain D: C.228, I.229, Y.233, S.236 Ligands: CLR.23 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:I.229, D:Y.233 CLR.29: 5 residues within 4Å: Chain E: F.116, I.229, Y.230 Ligands: PTY.26, CLR.30 3 PLIP interactions: 3 interactions with chain E Hydrophobic interactions: E:F.116, E:I.229, E:Y.230 CLR.30: 5 residues within 4Å: Chain E: C.228, I.229, Y.233, S.236 Ligands: CLR.29 2 PLIP interactions: 2 interactions with chain E Hydrophobic interactions: E:I.229, E:Y.233 CLR.35: 5 residues within 4Å: Chain F: F.116, I.229, Y.230 Ligands: PTY.32, CLR.36 3 PLIP interactions: 3 interactions with chain F Hydrophobic interactions: F:F.116, F:I.229, F:Y.230 CLR.36: 5 residues within 4Å: Chain F: C.228, I.229, Y.233, S.236 Ligands: CLR.35 2 PLIP interactions: 2 interactions with chain F Hydrophobic interactions: F:I.229, F:Y.233 CLR.41: 5 residues within 4Å: Chain G: F.116, I.229, Y.230 Ligands: PTY.38, CLR.42 3 PLIP interactions: 3 interactions with chain G Hydrophobic interactions: G:F.116, G:I.229, G:Y.230 CLR.42: 5 residues within 4Å: Chain G: C.228, I.229, Y.233, S.236 Ligands: CLR.41 2 PLIP interactions: 2 interactions with chain G Hydrophobic interactions: G:I.229, G:Y.233 CLR.46: 5 residues within 4Å: Chain H: F.116, I.229, Y.230 Ligands: PTY.43, CLR.47 3 PLIP interactions: 3 interactions with chain H Hydrophobic interactions: H:F.116, H:I.229, H:Y.230 CLR.47: 5 residues within 4Å: Chain H: C.228, I.229, Y.233, S.236 Ligands: CLR.46 2 PLIP interactions: 2 interactions with chain H Hydrophobic interactions: H:I.229, H:Y.233 CLR.52: 5 residues within 4Å: Chain I: F.116, I.229, Y.230 Ligands: PTY.49, CLR.53 3 PLIP interactions: 3 interactions with chain I Hydrophobic interactions: I:F.116, I:I.229, I:Y.230 CLR.53: 5 residues within 4Å: Chain I: C.228, I.229, Y.233, S.236 Ligands: CLR.52 2 PLIP interactions: 2 interactions with chain I Hydrophobic interactions: I:I.229, I:Y.233 CLR.58: 5 residues within 4Å: Chain J: F.116, I.229, Y.230 Ligands: PTY.55, CLR.59 3 PLIP interactions: 3 interactions with chain J Hydrophobic interactions: J:F.116, J:I.229, J:Y.230 CLR.59: 5 residues within 4Å: Chain J: C.228, I.229, Y.233, S.236 Ligands: CLR.58 2 PLIP interactions: 2 interactions with chain J Hydrophobic interactions: J:I.229, J:Y.233 CLR.64: 5 residues within 4Å: Chain K: F.116, I.229, Y.230 Ligands: PTY.61, CLR.65 3 PLIP interactions: 3 interactions with chain K Hydrophobic interactions: K:F.116, K:I.229, K:Y.230 CLR.65: 5 residues within 4Å: Chain K: C.228, I.229, Y.233, S.236 Ligands: CLR.64 2 PLIP interactions: 2 interactions with chain K Hydrophobic interactions: K:I.229, K:Y.233 CLR.70: 5 residues within 4Å: Chain L: F.116, I.229, Y.230 Ligands: PTY.67, CLR.71 3 PLIP interactions: 3 interactions with chain L Hydrophobic interactions: L:F.116, L:I.229, L:Y.230 CLR.71: 5 residues within 4Å: Chain L: C.228, I.229, Y.233, S.236 Ligands: CLR.70 2 PLIP interactions: 2 interactions with chain L Hydrophobic interactions: L:I.229, L:Y.233 CLR.76: 5 residues within 4Å: Chain M: F.116, I.229, Y.230 Ligands: PTY.73, CLR.77 3 PLIP interactions: 3 interactions with chain M Hydrophobic interactions: M:F.116, M:I.229, M:Y.230 CLR.77: 5 residues within 4Å: Chain M: C.228, I.229, Y.233, S.236 Ligands: CLR.76 2 PLIP interactions: 2 interactions with chain M Hydrophobic interactions: M:I.229, M:Y.233 CLR.83: 5 residues within 4Å: Chain N: F.116, I.229, Y.230 Ligands: PTY.80, CLR.84 3 PLIP interactions: 3 interactions with chain N Hydrophobic interactions: N:F.116, N:I.229, N:Y.230 CLR.84: 5 residues within 4Å: Chain N: C.228, I.229, Y.233, S.236 Ligands: CLR.83 2 PLIP interactions: 2 interactions with chain N Hydrophobic interactions: N:I.229, N:Y.233

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ruan, Z. et al., Structures of human pannexin 1 reveal ion pathways and mechanism of gating. Nature (2020)

Release Date

2020-06-03

Peptides

Pannexin-1: ABCDEFGHIJKLMN

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

M
M

N
N

Membrane

We predict this structure to be a membrane protein.
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Pannexin-1

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