SMTL ID : 6wfw.1

Crystal structure of Fab364 in complex with NPNA2 peptide from circumsporozoite protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x ASN- PRO- ASN- ALA- ASN- PRO- ASN- ALA: NPNA2 peptide(Non-covalent)

ASN-PRO-ASN-ALA-ASN-PRO-ASN-ALA.1: 16 residues within 4Å: Chain B: G.31, Y.32, G.33, I.50, W.52, F.53, Y.59, V.99, H.100, D.101, P.104 Chain C: Y.90, K.91, R.92, Y.93, W.94 14 PLIP interactions: 11 interactions with chain B, 3 interactions with chain C Hydrophobic interactions: B:I.50, B:W.52, B:W.52, B:Y.59, B:Y.59, B:V.99, C:Y.93 Hydrogen bonds: B:G.31, B:G.33, B:F.53, B:Y.59, B:D.101, C:Y.93, C:Y.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pholcharee, T. et al., Structural and biophysical correlation of anti-NANP antibodies with in vivo protection against P. falciparum. Nat Commun (2021)

Release Date

2020-07-29

Peptides

Immunoglobulin G-binding protein G: A
Fab364 heavy chain: B
Fab364 light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

C
L

Immunoglobulin G-binding protein G

Fab364 heavy chain

Fab364 light chain